Candidatus Borrelia undatumii: LKV13_04240
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Entry
LKV13_04240 CDS
T11889
Name
(GenBank) ATP-dependent RNA helicase
Organism
buw Candidatus Borrelia undatumii
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Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
WHD_HA2
AAA_22
ResIII
AAA_19
nSTAND_NTPase5
Cas3-like_C_2
Flavi_DEAD
AbpF_C_Ig
Motif
Other DBs
NCBI-ProteinID:
UER67968
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Position
complement(878329..880821)
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AA seq
830 aa
AA seq
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MDDLKLPIYKYKDELILLLRSNSVLIVESPTGSGKTTQIPRIIYEAGFAKVGRIGITQPR
RIATVSIAEYIARHIGVELGEEVGYKIRFQDVVSPKTKIKLMTDGVLLQELKKDTLLYEY
DVIIIDEAHERSLNIDFILGLIKDILSKRSDFKVIISSATINTQIFSNYFNNAPILNIET
ITYPVQIIYNPPLLNTSKGMILKIKEIVGNIIKDRQEGDILIFLSGEKEIKETIKELHDL
NLKKDLIILPLYGRMAKEAQEQIFMPTPKNRRKIIVSTNIAETSITIENIKIVIDSGKVK
TNKFQMKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYRRDEYQLRDEYQKEEIYR
TDLSEVVLRMADIGIKNFTKFDFISRPSIKSIQTASDILKSLDAINNKNELTEIGKYMII
FPLVPIHSRALVEAMINYQQAIYPTTIGLAFLSTSGIFLLPQDKEIEARQAHLKYKNPLG
DLIGFIKIFEDYKKASNKEDFAKENYLDLQGLEEIVNVQKQLENIVSSFNIPIIRKPEID
NGEGYLKSIMRGMKDYICFKTSRNKYKTIKAQNVVIHPGSLINTDSVRYFVAGEIIETSK
RYARSIGVLKKEWIDDVGVDENMRKSHSQENKTLNKAHKPLPKKEEKPLTEKEVFIGGKK
FSVQNENNIRYIELSLEEARELVLKGLTNAEEQMTKKIHFKLTHKDLIIFKSKKLIEIIN
IVANMGPDWTLVEKYENTNVNINEVLLIKDILERTMHFVKHPNKKSVLFLSLRYDHSDNF
WLKPQKSFIIAIEESMDSIKSLIDNQSHINKLSTIKKTINKIYKKLNVFF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcttaagcttcctatttacaaatataaagacgaattgattctactgttaagg
tcaaacagcgttttgatagtggaaagcccaacgggaagtggtaaaacaacacaaatacca
agaataatatacgaggcgggctttgcaaaggttggcagaattggtataactcaaccaaga
agaatagcaactgtgtcaatagcggagtatattgctagacacattggggtggaacttggg
gaagaggtaggttacaagataagatttcaggatgttgtaagccctaaaaccaaaattaaa
ttaatgactgatggtgtgctcttgcaagagcttaaaaaagacaccttactttatgaatat
gatgtaatcataatagatgaggcacatgagagaagtttaaacatagattttatattaggc
cttattaaagatattttaagtaaaagaagtgattttaaggttataatttcgtccgctaca
ataaatacgcagatattctcaaattactttaataacgccccgatacttaacatagaaacg
attacttatcctgtacagataatctacaaccctcctttacttaacacatcgaaggggatg
atacttaaaatcaaggaaatagttggcaacataattaaagacagacaagagggtgacata
cttattttcttatctggagaaaaggaaataaaggaaacaataaaagaactccatgacttg
aacttaaagaaagacttgatcattttgcccttgtacggacggatggcaaaagaagcacag
gaacaaatctttatgcccacacccaaaaatagaagaaaaatcatagtatcaacaaacatt
gcagagacttcgattacgattgaaaatatcaaaatagtaattgatagcggaaaagtaaaa
acaaacaaatttcagatgaaaacacatacttactcacttcaggaggtaccaatttcaaaa
tcatctgcaacgcagagggcaggtagagcggggcggctttctaaggggacatgttacaga
ttatacagaagagacgagtatcagttgagggacgaatatcaaaaggaagaaatatataga
acagatctatctgaagtagtactgaggatggcagatattggaattaaaaatttcacaaag
tttgacttcatctcaaggccttcaattaaatctattcaaacagcaagtgatatactgaag
tctttggatgcaataaataacaaaaatgagcttacagaaattgggaaatatatgattata
ttccctttagtaccaatacattcaagggctttagttgaggcgatgattaactatcagcag
gccatatatccaactacaattggtttggcattcctatctacaagtggaatctttttatta
cctcaggataaagaaatagaggctaggcaagctcatttaaaatataaaaacccgttggga
gacttaataggctttattaaaatatttgaagactataaaaaagcgtctaataaggaagac
ttcgctaaagagaattatttggatttacaaggccttgaagaaattgttaatgtacaaaaa
caacttgaaaatattgtaagtagctttaacattccgataatacgtaaacctgaaattgac
aacggtgagggctatctaaaatctataatgagaggtatgaaggactatatttgctttaaa
acttcgaggaataagtataaaacaataaaagcgcaaaatgtagtaatacatcctggatca
cttattaacacagactctgtgagatactttgttgcaggtgaaataatagaaacgagtaaa
agatatgctaggtctattggagtgcttaaaaaagaatggatagatgacgttggagttgat
gaaaatatgcgaaaaagccattcccaggaaaacaaaactttaaacaaagctcacaagcct
ttaccaaaaaaagaggagaaacctttaacagaaaaagaagtctttattggaggaaagaaa
tttagcgttcagaatgaaaacaacattcgctacatagaacttagcctagaggaagctagg
gagctagtattaaaaggcctaacaaatgcagaagaacaaatgactaaaaaaattcatttc
aaattaacacacaaagatttaataatatttaaaagtaaaaaattgatagaaataatcaac
atagtggccaatatgggacccgattggacccttgtggagaagtacgaaaatactaatgtt
aacattaatgaagttcttcttattaaagacatcctagagcgcaccatgcattttgttaaa
catccaaataaaaaatccgtactctttttatcactcagatatgatcactctgacaatttt
tggttgaaacctcaaaaaagcttcataatagcaattgaagaatcaatggatagcataaaa
agcctcatcgataaccaatcccatattaacaaactttctacaatcaaaaagacaataaac
aaaatctataaaaaacttaatgtttttttctaa
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