Butyricimonas faecalis: D8S85_09735
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Entry
D8S85_09735 CDS
T05785
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
buy
Butyricimonas faecalis
Pathway
buy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
buy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D8S85_09735 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buy03021
]
D8S85_09735 (rpoB)
03400 DNA repair and recombination proteins [BR:
buy03400
]
D8S85_09735 (rpoB)
Enzymes [BR:
buy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D8S85_09735 (rpoB)
Transcription machinery [BR:
buy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D8S85_09735 (rpoB)
DNA repair and recombination proteins [BR:
buy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D8S85_09735 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
PilJ_Pilin
Motif
Other DBs
NCBI-ProteinID:
AZS29800
UniProt:
A0A3S9VTI1
LinkDB
All DBs
Position
complement(2204098..2207910)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSSYNSNNRISFASIKNQLEYPDFLEVQLKSFKDFFQLGTTPENRKNEGLYTVFKENFPI
TDTRNNFVLEFLDYFIDPPRYTIEECLGQGLTYGAPLKAKLKLYCTDPEHEDFDTVIEDV
YLGNVPYMTPKGTFVINGAERVVVSQLHRSPGVFFGQSIHANGTKLYSARIIPFKGSWIE
FATDINNVMYAYIDRKKKLPVTTLLRAIGFETDKDILEIFGLADEVNVSRTGLKKVVGRR
LAARVLKSWIEDFVDEDTGEVVSIERNEIIVDRETVLEPEHIDAIVESGAKTILLHKEMQ
NLADYAIIYNTLQKDPCNSEKEAVLHIYRQLRSSEPPDEATARDVIDKLFFSDKRYDLGD
VGRYKLNKKLGLATDPDIRVLTKEDIIEIIKYLIRLLNAKTDVDDIDHLSNRRVRTVGEQ
LYNQFGVGLARMARTIRERMNVRDNEVFTPVDLINSKILSSVINSFFGTNALSQFMDQTN
PLAEITHKRRMSALGPGGLSRDRAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVYA
KINDLGFIETPYRKVNNGVVDLSEEGVRYYSAEEEEELVIAQASSAIDDDGKFTNKWVKA
RKDADFPLAAGEDVDLIDVAPNQIASIAASLIPFLEHDDANRALMGSNMMRQAVPIISPQ
SPIVGTGLEANLIKDSRTQVVAEGPGVIAYVDGRKIVVKYDRTEEEAFVSFEPDTKEYYL
PKYQRTNQSTTITLKPIVRKGQRVEEGQILTEGYSSEKGELALGRNLKVAFMPWKGYNYE
DAIVISENIVRNDVFTSVHVDEYSLEVRETKRGLEELTADIPNVSEEATKDLDENGIIRV
GARVQPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDVKDASLKASPSLKGVIIDKKL
FQRTVSDRKTKAAGKNILAELDEQFQRKVGDLTTLLIDKLFELVNGKTSQGVKNYLNEDI
VPKGVKFSYKMLQNMDFLQVNPNKWTTDKQKNDMIRDLLHNYIIKYKEIEGQIKRKKYNA
TVGDELPSGIIKMAKVYVAKKRKLQIGDKMAGRHGNKGIVSRVVRVEDMPFLSDGTPVDI
CLNPLGVPSRMNLGQVFETVLGWAGKNLGLKFATPIFDGASLDDINRYTDEAGVPRFGTT
YLYDGGTGERFDQPATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRF
GEMEVWALEAFGASHILQEILTVKSDDVMGRTKTYEHIVKGEPLPTPGIPESFNVLLHEL
RGLGLSVNLI
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatataattcaaacaatagaataagctttgcatcgataaagaatcagctggaa
taccctgattttcttgaagtgcaattaaagtctttcaaggacttttttcaattaggtacc
acacctgagaacagaaagaatgaaggcctttacacggttttcaaggagaattttcctatt
actgatactcggaacaactttgttttggaatttttggactattttatagatccacctcgc
tacacgatcgaggagtgtttgggtcagggattgacttatggcgcacccttgaaggcgaaa
ctgaagttgtactgtacagatccggaacatgaagattttgataccgttatcgaggatgta
tatttaggaaatgttccttacatgaccccgaaaggtactttcgtgatcaatggagcagag
cgagtggtcgtttctcagttacacaggtctcccggtgttttcttcgggcagagtattcat
gcgaatggtacgaagctttattccgctagaattattccgtttaagggttcctggatcgag
tttgccacggacatcaacaacgtgatgtacgcgtatatcgaccggaagaaaaagttaccg
gtaacgactcttttgcgggctatcggtttcgaaacggataaggatattctcgaaatattc
ggtctggctgatgaagtgaatgtttcccgtacggggttgaagaaagtcgttggcagacgg
ttggctgctcgtgttttgaaatcttggattgaagatttcgttgatgaagataccggtgaa
gttgtttctatcgagcgtaacgagattatagtcgatcgtgaaacagtactggagcctgag
catattgatgcgattgtcgagtcaggtgcgaagacgatccttcttcacaaggagatgcaa
aatctggcagattatgccattatatataacacgttacaaaaagacccgtgtaactcggag
aaagaggctgtgttgcacatctacaggcagttgcgtagttcggagccgcctgatgaggct
actgcccgcgatgtgatcgacaagttgttcttctctgataaacgttacgatttgggtgac
gtgggacgttacaagttgaacaagaagttgggacttgcaacagatccggatatccgtgtc
ttgacgaaagaggatattatcgagatcatcaaatatttgattcgtttgttgaacgccaag
actgacgtggacgatattgaccacttgagcaatcgtcgcgtacgtactgtaggcgaacaa
ttatataatcaattcggtgtaggattggctcgtatggcccgtacgattcgtgaaagaatg
aacgtgcgcgacaacgaggtgttcaccccggttgatttgatcaactcgaagattttgtct
tccgtgatcaactcgttcttcggaacgaacgcgttgtctcagttcatggatcagacgaat
ccattggccgagattactcacaagagacgtatgtcagccttaggacctggtggtctttcc
agagatcgtgcaggattcgaggtgcgagatgtacactatactcactatggtcgtttgtgt
ccgatcgaaacgcctgagggaccgaatatcggtttgatttcttctctctgcgtgtatgct
aagatcaacgacttaggatttatcgaaactccttaccgtaaggtgaataatggcgtggtg
gatctttccgaagaaggagtacgttattattctgcagaggaagaggaggaactggttatt
gcccaggcaagttctgcgatcgatgacgatggcaagtttaccaataaatgggtgaaagcc
agaaaggatgcggacttcccgttggcagccggagaggatgtcgatttgattgacgttgcc
ccgaaccagattgcttctattgcggcttctttgatcccgttcttggagcatgacgatgct
aaccgtgcgttgatgggatcgaacatgatgcgtcaggcagttccgattatttccccgcaa
tccccgatcgtgggaaccggtttggaagccaatttgattaaggattccagaacgcaggtg
gttgccgagggcccgggagtgatcgcttatgttgacggacgcaagattgttgttaaatat
gaccgtacggaagaagaggcttttgtaagctttgaacccgatacgaaagaatattacctg
ccgaaataccaacgtacgaaccagagtacgacgatcacgctgaaaccgatcgtgagaaag
gggcaacgcgtggaagaaggccagatattgacagaaggatactcttcagagaagggagaa
ttggctctcggacgaaacttgaaagtggcattcatgccgtggaaagggtacaactacgag
gatgctatcgtgatttcggagaatatcgtgcggaatgatgtctttacatctgttcacgtg
gacgagtattctttggaagtgcgtgaaacgaaacgtggattggaagagttgacggctgat
attccgaacgtaagtgaggaggccacgaaggatttggatgaaaacggaatcattcgtgta
ggggctcgtgttcaaccgggagatatcctgattggtaagattaccccgaaaggtgagtct
gatcctagtccggaagaaaaattgttgagagcgatcttcggtgataaagccggtgatgtg
aaagatgcttcgttgaaagcttctccttcattgaaaggtgttattatcgataagaagttg
ttccaacgtacggtaagtgatcggaaaacgaaggcagccggtaaaaatatcttggccgag
ttggatgaacaattccaacgtaaagtcggagatttaactactttattgatcgataaatta
ttcgagttggtaaacggtaagacttcacaaggtgtgaagaattacttgaacgaggatatc
gttccgaagggagtgaagttctcttacaagatgttgcagaatatggacttcttgcaggtc
aacccgaataagtggacgactgataagcaaaagaacgatatgatccgtgacttgttgcat
aattatatcatcaagtacaaggagatcgaaggacagattaaacgtaagaaatataatgct
accgtcggtgatgagcttccttccggaattatcaagatggcgaaggtttacgtggctaag
aaacgtaaattgcaaatcggtgataagatggcaggacgtcacggtaacaagggtattgta
tctcgtgtggtaagggtagaggatatgccgttcttgtctgacggaaccccggttgatatt
tgtttgaacccgctaggtgtgccttcccgtatgaacttggggcaggtgtttgaaaccgtg
ttgggttgggccggaaagaatttgggattgaagtttgcaaccccgattttcgatggtgct
tctttggatgatattaacagatatacggatgaagcaggtgtacctagattcggaaccacc
tatttgtatgacggaggtacgggagaacgtttcgaccagccggcaaccgtgggtgtgatc
tacatgttgaaactgggacacatggttgatgacaagatgcacgctcgttctatcggacct
tactcgttgatcacgcagcaacctcttggaggtaaggctcagttcggaggtcagcgtttc
ggagagatggaggtttgggctcttgaggctttcggagcttcacacatcttacaggaaatc
ttgaccgtgaagtcagatgacgtgatgggtagaaccaagacttacgagcatatcgtgaaa
ggtgaacctcttccgacacccggaattccggaatcattcaacgtgttgttgcatgaactt
cgcgggttgggattgagcgttaatttaatataa
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integrated database retrieval system
