Paraburkholderia phytofirmans OLGA172: AYM40_00010
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Entry
AYM40_00010 CDS
T05111
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz03030
DNA replication
buz03430
Mismatch repair
buz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM40_00010
03430 Mismatch repair
AYM40_00010
03440 Homologous recombination
AYM40_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_00010
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_00010
Enzymes [BR:
buz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM40_00010
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYM40_00010
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYM40_00010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ANB70909
UniProt:
A0A167VLJ4
LinkDB
All DBs
Position
1:2047..3150
Genome browser
AA seq
367 aa
AA seq
DB search
MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPEVSFLSTDLELQITTRADF
GVGGDSVATTVAARKLLDILRAMPDGQVTLTLNDKRLTVQSGKSRFALQTLAADEFPTVA
QAKDYGANLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGDQLMAVATDGHRLAF
SSMKIEGSFARQEVIIPRKTILELQRLLEDIDDTLKIDIAPTQVKFTFGQVELVSKLVEG
KFPDFQRVIPKSHKNQFVIGREELQRSLQRAAILTSDKFKGVRCIIEPGQLKIMSTNADQ
EEAQEELEIAYDGDSVDIGFNVTYLLDVLANLKVDMLQVSLGDASSSALITIPENDEFKY
VVMPMRI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcaagaccgaacgcgataacctcctcaggccgctgcaaaccgtgagcggc
atcgtcgaacgccgccatacgttgccgatcctcgccaatttgctgattaccaagaacggc
cctgaagtgtcgttcctgtcgacggacctcgagttgcagatcaccacgcgtgccgatttt
ggcgtgggcggcgattcggtcgcgaccacggtggcagcaagaaagctcctcgacattctg
cgcgccatgcccgacgggcaggtcacgctcacgctgaacgacaagcgtttgaccgtgcaa
tccggcaagagccgctttgcgctgcaaactctggcggccgacgagttcccgaccgtcgct
caggctaaagactacggcgcgaacctggtggttccccagaaaacgttccgccagttgctc
ggcatggtccatttttcgatggcccagcaggacatccgctactacctgaacggcatgctg
ctggtggtagatggtgaccaactgatggcggtcgcaacagacggccaccgtctcgcgttc
tcgtcgatgaagatcgaaggctcgttcgcgcgtcaggaagtaatcattccgcgcaagacg
attctcgaactgcagcgtctgctggaagacatcgacgacacgctgaagatcgacatcgcg
ccgacgcaggtgaagttcacgttcggccaggtcgaactggtgtcgaagctggtggaaggc
aaatttcccgacttccagcgcgtgattccgaagtcgcacaagaatcagttcgtgatcggc
cgtgaagaactgcagcgctcgctgcaacgcgccgcgattctgacgtcggacaaattcaag
ggcgtgcgctgcattatcgagccgggccagttgaagatcatgtcgaccaacgccgatcag
gaagaggcgcaggaagaactggaaatcgcgtacgacggcgacagcgtcgatatcgggttc
aacgtcacgtatctgctcgacgtgctcgcgaacctgaaggtcgacatgttgcaagtgagc
cttggcgacgccagctccagcgcgttgatcacgattcccgagaacgacgaattcaaatac
gtcgtgatgccgatgcgcatctaa
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