Paraburkholderia phytofirmans OLGA172: AYM40_00015
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Entry
AYM40_00015 CDS
T05111
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_00015 (gyrB)
Enzymes [BR:
buz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AYM40_00015 (gyrB)
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Topoisomerases
AYM40_00015 (gyrB)
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYM40_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ANB70910
UniProt:
A0A167VLL2
LinkDB
All DBs
Position
1:3267..5738
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AA seq
823 aa
AA seq
DB search
MTETNNSQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGHCNDIQVIIHADNSISITDNGRGVPTGLKMDDKHDPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSAWLRLTIRRDGKKHFMEFHRGVPQNRVIEEIDGVAVSPIQL
IGDTENRGTEVHFLADETIFGNVEYHYDILAKRIRELSFLNNGVRIKLTDQRTGKEEDFA
FVGGVKGFVEYINKNKAVLHPNIFHISGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVLNKYITDHEVAKKAKVETAGDDMREGLSCVLSVKVPEPKFSAQTK
DKLVSSEVRAPVEDVVAKALEEFLLETPNDAKIICGKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPDMIERGYIYIAQPPLFKIKAGKDERYLKDEAEVNAHILKLALQGSELLASEGATPITG
DALGELARAYLLAQAVVNRLSRLYDAGALEAVMDGVVIDLSSEEAAAVSAAALEAKLRDD
ALKPEVKVTTMYDPVRELRSLRVARTHHGNQKISVLDQDFQLTADYQQLINTANTFKGLI
GTGAVIKRGERSMAVTDFKSAMKWLLADAERNISKQRYKGLGEMNPGQLWETTMDPTVRR
LLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacgaacaattcgcaacccgataacagctacggcgcctcctcgattcagatc
ctcgaaggtctggaggcggtacgcaagcggccggggatgtacatcggggatacgtcagac
gggaccggtttgcatcacctcgtattcgaagtgctggacaactccatcgacgaagcgttg
gcggggcattgcaacgatatccaggtgatcattcacgcggacaactcgatctcgatcacc
gacaacggccgcggtgtgccgaccggcctgaagatggacgacaagcacgatccgaagcgc
agcgccgctgaaatcgtgatgaccgaactgcacgccggcggcaagttcgaccagaacagc
tacaaggtgtccggcggcctgcacggcgtgggcgtctcgtgcgtgaacgcgctctcggcg
tggctgcgcctgaccattcgccgcgacggcaagaagcacttcatggaattccaccgtggc
gtgccgcagaaccgcgtgatcgaagagatcgacggcgtggctgtctcgccgattcagctg
attggcgacaccgaaaaccgcggcaccgaagtgcacttcctggctgacgagacgatcttc
ggcaatgtcgaatatcactacgacattctggccaagcggattcgcgaactgtcgttcctg
aataacggcgtgcggatcaagctgaccgaccagcgcacgggcaaggaagaagatttcgcg
ttcgtgggcggcgtgaagggttttgttgagtacatcaacaagaacaaggccgtgctgcac
ccgaacattttccacatcagcggcgagaaagacggcgtgggcgtggaagtggcgatgcag
tggaacgacagctacaacgaaaacgtgctgtgcttcacgaacaacattccgcagcgcgac
ggcggcacccacctgaccgggttgcgtgcggcgatgacgcgcgtattgaacaagtacatc
accgatcacgaagtcgcgaagaaagcgaaggtcgaaacggccggcgacgacatgcgcgaa
gggctctcgtgcgtgctgtcggtgaaggtgccggagccgaagttcagcgcgcagaccaag
gacaagctggtgtcgtcggaagtgcgcgcgccggtggaggatgtggtcgcgaaggcgctc
gaagaattcctgctggaaacgccgaacgacgcgaagatcatttgcggcaagattgttgat
gcggcgcgggcgcgggatgcggctcggaaggcgcgtgaaatgacgcgtcgtaagggcgtt
ctggatggcgttggtttgcctgggaagctggcggattgccaggagaaggacccggcgaag
tctgagatttatatcgtcgagggtgactcggcaggtggctcggcgaagcaggggcgtgac
cggaagtttcaggcgatcttgccgctgcgcggcaaggtgctcaacgtggagaaggcgcgc
tatgacaagctgctttcttcggagcagattgtgacgctgattacggcgctgggttgcggg
atcggcaaggaagactacaacctcgacaagctgcgttatcaccgcatcatcatcatgacc
gatgctgacgtggacggcgcgcacatccgcaccctgctgctgacgttcttctatcgtcag
atgccggacatgatcgagcgtgggtatatctatatcgcgcagccgccgctgttcaagatc
aaggcgggtaaggatgagcggtatttgaaggatgaggctgaggttaatgctcacatcctg
aagctggctttgcaggggtcggagttgttggcttcggaaggtgctacgcctatcactggg
gatgcgcttggggagttggctcgggcttatttgttggctcaagctgttgtgaaccgactg
agccggttgtatgacgctggggcgcttgaggctgtgatggatggggttgttatcgacctg
tctagcgaggaagcggctgcagtgtcggcggcggcgcttgaggccaagttgcgtgatgat
gcgttgaagcctgaggttaaggtcacgacgatgtatgacccggtgcgtgagctgcgctcg
ctgcgcgtcgcgcggactcatcacggtaatcagaagatttctgtgctggatcaggatttc
cagctgactgctgattaccagcagctgattaataccgctaatacgtttaaggggttgatt
gggactggtgctgtcattaaacgtggcgagcggagtatggctgttaccgacttcaagagc
gctatgaagtggttgctggctgatgctgaacgcaatatctcgaagcagcgctataagggt
ctcggtgagatgaaccctgggcagctttgggagacgacgatggatccgactgtgcgtcgc
ttgcttcgtgtgcagattgaggatgctattgcggctgatgggatctttactacgctcatg
ggggatgatgtggagccgcggcgggcgtttattgagtcgaatgcgttgcgggcggggaat
attgacgtttga
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