Paraburkholderia phytofirmans OLGA172: AYM40_00500
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Entry
AYM40_00500 CDS
T05111
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz00300
Lysine biosynthesis
buz00470
D-Amino acid metabolism
buz01100
Metabolic pathways
buz01110
Biosynthesis of secondary metabolites
buz01120
Microbial metabolism in diverse environments
buz01230
Biosynthesis of amino acids
Module
buz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYM40_00500
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYM40_00500
Enzymes [BR:
buz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AYM40_00500
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
TAL_effector
CitF
Motif
Other DBs
NCBI-ProteinID:
ANB71000
UniProt:
A0A160FFY2
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All DBs
Position
1:complement(119638..120501)
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVDGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDKRSVRVQVQNGTILLTMQENGEVLVDM
GAPVFEPERVPFATKGLEGRREGTDTLWPLDVNGVTRWISVVSMGNPHAVQVVEDVEDFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDSTQEGAPLLMAGPAATVFEGEIELAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaaaatgcacggcgcgggtaacgacttcgtcgtgctcgacggc
tacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttc
ggcgtcggcgccgaccagttgctgctggtcgagaagcccaccgtagacggcgtcgatttc
agataccgcatcttcaattgcgacggcggcgaggtcgagcactgcggcaacggcgcgcgc
tgcttcgtcaagttcgtgcgcgacagcggcctgaccgacaagcgcagcgtgcgcgtgcag
gtgcagaacggcaccattctgctgaccatgcaggaaaacggcgaagtgctggtcgacatg
ggcgcgcccgtgttcgaaccggagcgcgtaccgttcgccaccaaaggcctcgaaggccgc
cgcgagggcacggacacgctctggccgctcgacgtgaacggcgtgacgcgctggatttcg
gtagtgtccatgggcaatccgcacgccgtgcaagtggtcgaggacgtcgaagatttcccg
gtactcgtcgaaggcccggtgatcgaacggcatgcacgctttccgcaacgggtgaacgcg
ggcttcatgcagatcgtcggccgtagcgagatcaagctgcgggtctacgaacgcggcgcc
ggtgaaacgctggcgtgcggcacgggcgcgtgtgcggcagtcgctgccggcattcgccgc
gggctgctggatgcgcccgtgctggtgcacacgcacggcggcaagctgaccatcacgtgg
gacagcacgcaagaaggtgcgccactgctcatggccggccctgcggcaaccgtcttcgaa
ggcgagatcgaactggccgactga
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