KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_00500
Entry
AYM40_00500       CDS       T05111                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz00300  Lysine biosynthesis
buz00470  D-Amino acid metabolism
buz01100  Metabolic pathways
buz01110  Biosynthesis of secondary metabolites
buz01120  Microbial metabolism in diverse environments
buz01230  Biosynthesis of amino acids
Module
buz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:buz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AYM40_00500
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AYM40_00500
Enzymes [BR:buz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AYM40_00500
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF TAL_effector CitF
Other DBs
NCBI-ProteinID: ANB71000
UniProt: A0A160FFY2
LinkDB
Position
1:complement(119638..120501)
AA seq 287 aa
MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVDGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDKRSVRVQVQNGTILLTMQENGEVLVDM
GAPVFEPERVPFATKGLEGRREGTDTLWPLDVNGVTRWISVVSMGNPHAVQVVEDVEDFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDSTQEGAPLLMAGPAATVFEGEIELAD
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaactgaaattcaccaaaatgcacggcgcgggtaacgacttcgtcgtgctcgacggc
tacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttc
ggcgtcggcgccgaccagttgctgctggtcgagaagcccaccgtagacggcgtcgatttc
agataccgcatcttcaattgcgacggcggcgaggtcgagcactgcggcaacggcgcgcgc
tgcttcgtcaagttcgtgcgcgacagcggcctgaccgacaagcgcagcgtgcgcgtgcag
gtgcagaacggcaccattctgctgaccatgcaggaaaacggcgaagtgctggtcgacatg
ggcgcgcccgtgttcgaaccggagcgcgtaccgttcgccaccaaaggcctcgaaggccgc
cgcgagggcacggacacgctctggccgctcgacgtgaacggcgtgacgcgctggatttcg
gtagtgtccatgggcaatccgcacgccgtgcaagtggtcgaggacgtcgaagatttcccg
gtactcgtcgaaggcccggtgatcgaacggcatgcacgctttccgcaacgggtgaacgcg
ggcttcatgcagatcgtcggccgtagcgagatcaagctgcgggtctacgaacgcggcgcc
ggtgaaacgctggcgtgcggcacgggcgcgtgtgcggcagtcgctgccggcattcgccgc
gggctgctggatgcgcccgtgctggtgcacacgcacggcggcaagctgaccatcacgtgg
gacagcacgcaagaaggtgcgccactgctcatggccggccctgcggcaaccgtcttcgaa
ggcgagatcgaactggccgactga

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