Paraburkholderia phytofirmans OLGA172: AYM40_03005
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Entry
AYM40_03005 CDS
T05111
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYM40_03005 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buz03019
]
AYM40_03005 (groEL)
03110 Chaperones and folding catalysts [BR:
buz03110
]
AYM40_03005 (groEL)
03029 Mitochondrial biogenesis [BR:
buz03029
]
AYM40_03005 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
buz04147
]
AYM40_03005 (groEL)
Enzymes [BR:
buz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AYM40_03005 (groEL)
Messenger RNA biogenesis [BR:
buz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AYM40_03005 (groEL)
Chaperones and folding catalysts [BR:
buz03110
]
Heat shock proteins
HSP60 / Chaperonin
AYM40_03005 (groEL)
Mitochondrial biogenesis [BR:
buz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AYM40_03005 (groEL)
Exosome [BR:
buz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AYM40_03005 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AYM40_03005 (groEL)
Exosomal proteins of breast cancer cells
AYM40_03005 (groEL)
Exosomal proteins of colorectal cancer cells
AYM40_03005 (groEL)
Exosomal proteins of bladder cancer cells
AYM40_03005 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DUF5881
Motif
Other DBs
NCBI-ProteinID:
ANB71452
UniProt:
A0A160FH54
LinkDB
All DBs
Position
1:707054..708694
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVTAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAATIEARVKQVRTQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNFGYNA
ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMGGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtcgtattcggtgattccgcccgtgccaagatggttgaaggcgtg
aacatcctcgctaacgctgtgaaggtcacgctgggcccgaagggtcgcaacgttgtcctg
gaacgcagcttcggcggcccgacggtcaccaaggatggtgtttcggtcgcgaaagagatc
gaactgaaagacaagcttcagaacatgggcgcacaaatggtcaaggaagtggcttccaag
accagcgacaacgcaggtgacggcaccacgaccgcaacggttctggctcagtcgatcgtc
cgcgaaggcatgaagtacgttgcatcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgtgacggccgcgatcgaagaactgcgcaagatcagcaagccgtgcacgacc
aacaaggaaatcgctcaagtcggcgcgatctcggcgaacagcgattcgtcgatcggcgac
cgtatcgctgaagcgatggacaaggttggcaaggaaggcgtcatcaccgttgaagacggc
aagtcgttgcaagacgagctggacgtggtcgaaggtatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaacccggacaagcaagttgctgtgctcgaaaacccgttcgtg
ctgctgcacgacaagaaggtttcgaacatccgtgatctgctgccggtactggaacaagtc
gccaaggctggccgtccgctgctgatcatcgcagaagacgtcgaaggcgaagcgctggct
acgctggttgtgaacaacatccgcggcatcctgaagacggttgctgtcaaggctccgggc
ttcggcgatcgtcgtaaggccatgctggaagacatcgcgatcctgaccggcggtcaagtt
atcgctgaagaaaccggcctgacgctcgaaaaggcaacgctggcggaactgggtcaagcg
aagcgtatcgaagtgggcaaggaaaacaccacgatcatcgacggcgctggcgaagctgca
accatcgaagcacgtgtgaagcaagttcgcacgcaaatcgaagaagcaacgtcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggctggcggtgttgcagtgatcaag
gtcggcgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgtgtcgaagacgcactg
cacgcaacgcgcgcagctgtggaagaaggcatcgtggctggcggcggcgtcgcactgatc
cgtgcacgtacggcaatcgctggtctgaagggcgctaacgccgatcaggacgcaggtatc
aagatcgtgctgcgcgcgatggaagagccgctgcgccagatcgtcacgaacggtggcgaa
gaagccagcgtcgtggtggcagctgttgctgctggccaaggcaacttcggctacaacgca
gcaaccggcgagtacgtcgacctggttgacgcaggtgtcgtggacccgacgaaggtgacg
cgcacggcgctgcaaaacgcagcttcggtcgctggcctgctgttgaccaccgacgcagct
gtttgcgaactgccgaaggaagatgctccgatgggcggcggtatgcccggcggcatgggc
ggcatgggcatggacatgtaa
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