Paraburkholderia phytofirmans OLGA172: AYM40_04270
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Entry
AYM40_04270 CDS
T05111
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_04270
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AYM40_04270
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
ANB71675
UniProt:
A0A160FHV3
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All DBs
Position
1:complement(1005622..1006068)
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AA seq
148 aa
AA seq
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MVDIVDSATRSRMMSGIRGRNTKPEILIRSLLHGRGFRFRLDARDLPGRPDIVLPRYRAV
VLVHGCFWHGHDCHLFKWPQTRPEFWRDKIGRNRSNDDKVQAALLASGWRVGVVWECALR
GANRDIEGVLQRLVEWLKSDAPRFEERG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatatcgtcgacagcgcaacgcgcagccggatgatgtccggcattcgcggccgc
aacacgaaacccgaaattctgatccgcagcctgctgcatggccggggttttcgcttccgt
ctggacgcacgcgacctgccgggccgcccggacatcgtgctgccgcgctaccgcgctgtc
gtactggtgcacggctgcttctggcacggtcacgactgtcatcttttcaaatggccgcaa
acgcggccggagttctggcgcgacaagatcggccgaaatcgcagcaacgacgacaaagtt
caggcggcgttgctcgccagcggctggcgcgtcggggtggtatgggaatgcgctttgcgt
ggcgcgaatcgcgatatcgagggcgtgttgcaacggctcgtcgagtggttgaagagcgac
gcgccgcgcttcgaggagcgcggctga
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