Paraburkholderia phytofirmans OLGA172: AYM40_06085
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Entry
AYM40_06085 CDS
T05111
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
buz03000
]
AYM40_06085
Transcription factors [BR:
buz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AYM40_06085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
SBP_bac_3
P22_Cro
NMT1_3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ANB71986
UniProt:
A0A160FJ88
LinkDB
All DBs
Position
1:1408040..1409011
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AA seq
323 aa
AA seq
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MLKAATFRQLKTLHTVAKLGSVSRAAEALKLTQPAVSLQVRLLEEAAGAPLLQRVGRGVQ
LTAAGEILARYALEILDLWNGAADDLAALHGEQGGTLRIGAITTAEYLIPPFLVRFTELR
PQVKVQFKVGNRADIIRMLATHEIDLAVMGSAPRELRTAATAFAKHPMAFVASPAHALMK
KKRLSLDDLQTANLFVRERGSGTRSTVENLFRLAGHKLHIGSELSSNEAIKQLVEAGLGV
AFLSLHACSLEFQAGLLALLPLPANPIERDWYVMHVSDKRLPHVAGLFRDFLIEHGMSGA
VPVPLPTVAAAKRRRQAREASPV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagccgccacgttccgtcaattgaagaccttgcatacggtcgcgaagctcggc
agcgtgtcgcgcgcggccgaagcattgaagctcacgcaaccggcggtgtcgcttcaggtg
cgtctgctcgaagaggctgcgggggcgccgctgttgcagcgggtgggccgcggcgtgcag
ttgaccgcagcgggcgagatcctcgcgcgttatgcgctggagatcctggatctatggaat
ggcgcggcggacgatctcgccgcgttgcacggcgagcagggcggcacgctgcggatcggc
gcgatcacgaccgctgagtacctgatccccccatttctggtgcgcttcaccgagttgcgc
ccgcaagtgaaggtgcagttcaaggtcggcaatcgagcggacatcatccgcatgttggcc
acgcacgagatcgatcttgcggtgatgggcagcgcgccgcgcgaattgcgcacggcggca
actgcctttgcgaagcatcccatggcgttcgtcgcctcgcccgcccatgcgctgatgaag
aaaaagcgcctgtcgttggacgatctgcaaacggcgaatctgttcgtgcgagagcggggt
tcgggcacgcgctcgaccgtcgagaatctgtttcggctggccggccacaagctgcatatc
ggctccgaactctcgagcaacgaggcgatcaagcaattggtcgaggcgggtttgggcgtc
gcgtttctgtcgctgcatgcgtgctcgctggaatttcaggccggcttgctggcgttgctg
cccttgcccgccaatccgatcgagcgcgactggtacgtgatgcacgtgtccgataaacgc
ctgccgcacgttgccgggctgttccgcgattttctgatcgagcacggcatgtccggcgcg
gtgccggtgccgctgccgacggtcgccgcggcgaagcggcgccgtcaggcgcgtgaagca
agtccggtctga
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