Paraburkholderia phytofirmans OLGA172: AYM40_07590
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Entry
AYM40_07590 CDS
T05111
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_07590
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_07590
Enzymes [BR:
buz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AYM40_07590
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Topoisomerases
AYM40_07590
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYM40_07590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ANB72237
UniProt:
A0A161HY99
LinkDB
All DBs
Position
1:complement(1774141..1775451)
Genome browser
AA seq
436 aa
AA seq
DB search
MAATTDPTQRRTDDIAQQAAPAAMPPGLRHSDDTTPGYTRRREKDGFVYFDVSGKRIDDA
SEIDRINALAIPPAYEDVWICPDARGHLQATGRDARGRKQYRYHARWRETRDANKYERMA
AFGRALPKIRRRVACDLKLPGMPCDKVIAAIVQLLDTTLIRVGSVEYARDNQSYGLTTLR
KKHVKIEAGQLRLKFRGKSGIEHDVTVDHPRVRRIVRRCADLPGHALFQYLDEDGTRRTV
GSADINDYLRRASDADFTAKDYRTWAGSVYALAALRWLKYSSAAEARRHIVATVKAVATL
LRNTPAVCRRCYIHPAVISAFEADELHDLPPAQALRGLKVDEAAFAALLVQLEKHAAKLA
RQAGTRGRKPRDSAVTGGVEGSLPTLLKKSRAVRQATIAKPAASAGSLTSRRVATAPSAA
SRFRSADAASRSSGRR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacgaccgacccgacccagcgccgcactgacgacatcgcccagcaagctgcc
cctgccgcgatgccgcccggtctgcggcattcggacgacaccacgcccggctacacgcgc
aggcgtgaaaaagatggctttgtatacttcgacgtgagcggcaaacgcatcgacgacgca
agcgaaattgatcgcatcaacgcattggcaattccaccggcgtacgaggacgtatggatc
tgccccgacgcccgcggtcatttgcaggcaaccggccgtgacgcgcgcggccgcaagcaa
taccgctatcacgcgcgctggcgcgagacacgtgacgccaacaaatacgagcgcatggcc
gcgttcggccgcgcgctgccgaagatccgcaggcgcgtcgcatgcgacctgaagttaccg
ggcatgccgtgcgacaaggtcatcgccgcaatcgtgcagctgctcgacacgacgctgatc
cgcgtcggcagtgtcgaatacgcgcgcgataaccagtcgtacgggctgacgacgctgcgc
aagaagcatgtgaagatcgaagcaggccaattgcgcctgaagttccgcggcaagagcggc
atcgagcacgatgtcacggtggaccatccacgagtcaggcgcatcgtgcggcgctgcgcc
gacttgccggggcacgctctgttccagtatctcgacgaagacggcacgcgccgcaccgtc
ggctcagcggacatcaacgactacctgcgccgcgcaagcgatgcggatttcaccgcgaag
gattaccgcacatgggcgggcagcgtctatgcactagccgcgctgcggtggctgaaatac
agcagcgcggcggaagcacgccggcatattgtcgcaaccgtcaaggccgtagcaacactg
ttgcgcaatacgcccgctgtatgccgacgctgctacattcacccggccgtgatcagcgcg
ttcgaagctgacgaattgcacgacttgccgcccgcccaggcgcttcgcggtctgaaagtg
gatgaagcggcgtttgctgcactgctcgtgcaactcgagaagcatgccgcgaagctcgcg
cgtcaagcgggcacccggggccgcaagccgcgcgactcggcggtgactggcggcgtcgaa
ggctcgctgccaacgttgctgaagaagtcgcgcgcggtgcgccaggcaaccattgcgaaa
cccgctgccagcgccggctcgctaacatctcgccgcgtggccacggcacccagcgccgcc
agccggtttcgctcggcggacgctgccagccgatcttcaggtcgccggtga
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