KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_11105
Entry
AYM40_11105       CDS       T05111                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
buz  Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:buz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buz03032]
    AYM40_11105
   03036 Chromosome and associated proteins [BR:buz03036]
    AYM40_11105
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_11105
DNA replication proteins [BR:buz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AYM40_11105
Chromosome and associated proteins [BR:buz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AYM40_11105
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AYM40_11105
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK CHX17_2nd HU-CCDC81_euk_1 NTPase_P4
Other DBs
NCBI-ProteinID: ANB72855
UniProt: A0A160FKF0
LinkDB
Position
1:complement(2554962..2555234)
AA seq 90 aa
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGALKQGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKIPKFRPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaacggaattgatcgatcacattgcgcagcaagccgatatttcgaaggccgct
gcaggccgtgcactggatgcggtgatcggtggggtcaaaggtgcgttgaagcaaggcggt
tcggtgactttggtcggtttcggtacgtttgccgtgggcaagcgtactgcgcgtacagga
cgcaatccgcgcaccggcgctgccatcaagatcaaggcagcgaagattcctaaatttagg
cctggcaaagctctgaaggatgcgctaaactaa

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