Paraburkholderia phytofirmans OLGA172: AYM40_11105
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Entry
AYM40_11105 CDS
T05111
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_11105
03036 Chromosome and associated proteins [BR:
buz03036
]
AYM40_11105
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_11105
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AYM40_11105
Chromosome and associated proteins [BR:
buz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AYM40_11105
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AYM40_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
CHX17_2nd
HU-CCDC81_euk_1
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
ANB72855
UniProt:
A0A160FKF0
LinkDB
All DBs
Position
1:complement(2554962..2555234)
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AA seq
90 aa
AA seq
DB search
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGALKQGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKIPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacggaattgatcgatcacattgcgcagcaagccgatatttcgaaggccgct
gcaggccgtgcactggatgcggtgatcggtggggtcaaaggtgcgttgaagcaaggcggt
tcggtgactttggtcggtttcggtacgtttgccgtgggcaagcgtactgcgcgtacagga
cgcaatccgcgcaccggcgctgccatcaagatcaaggcagcgaagattcctaaatttagg
cctggcaaagctctgaaggatgcgctaaactaa
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