Paraburkholderia phytofirmans OLGA172: AYM40_11370
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Entry
AYM40_11370 CDS
T05111
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buz03021
]
AYM40_11370
Transcription machinery [BR:
buz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYM40_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
KORA
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ANB72900
UniProt:
A0A160FKE6
LinkDB
All DBs
Position
1:complement(2624614..2625696)
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AA seq
360 aa
AA seq
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MPKSKRRLPQAESETISRVTSASVEEGGASEAEDEIVEERDLDERQGSMEEAGEAREGAS
EAPPDVDDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQKYSRLAKAGEFEARQVMIE
RNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIER
AIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMNSGEAAERRDASIDDIAYLTGKTTDE
VTDILALNEHTASLDAPLDLDPASSLLDLLSDDQSQSPDAEVQHRELETLTRAWLARLSD
KHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDAVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccgcctgccgcaagccgagtctgagacgattagccgcgtcacg
tccgcttcggtggaggagggcggcgcttcggaagcggaagacgagatcgtcgaggagcgc
gatctcgacgaacgccagggcagcatggaagaagctggcgaggcccgcgaaggcgcgagc
gaagcgccgcccgacgtagacgatttccgcgcgttgctgcaagccgagctgacggccgac
acgattcagcattacctgaaccgcatcagcgtcaagccgcttctgaccgtcgaggaagag
cagaagtattcgcgcctggcgaaggcgggcgagttcgaagcgcggcaagtgatgatcgaa
cgtaatctgcggctcgtcgtcagcatcgcgaaggggtacctgaaccgcggcgtgccgctg
ctcgatctgatcgaagagggcaacctcggcctgatgcacgccatcgagaaattcgatccc
acgcgtggcttccgtttctccacgtatgccacctggtggattcgccagagcatcgagcgc
gcgatcatgaaccaggcgcgcacggtgcgtttgccggtgcacgtgatccgtgagctcaat
caggtgctgcgcgcaaagcgccatctggaaaagaattcgatgaattccggcgaagcagcc
gagcgccgcgacgccagcatcgacgacatcgcctatctgaccggcaagaccaccgacgaa
gtcaccgacattctcgcgctgaacgaacacaccgcatcgctcgatgcgccgctcgatctc
gacccggcgagcagcctgctcgatctgctgtccgacgaccaaagccagtcgccggacgcc
gaagtgcagcatcgcgagctggaaacgcttacacgcgcatggctcgcgcgcctgtcggac
aaacatcgtcatgtgatcgagcgccgcttcgggctgaaccacatcgagcccgccacgctt
gaagagctggccgacgaaatgggcctcacgcgcgagcgtgtacgccagatccaacaggaa
gcgctggtgcggctaaagcgcttctttgcctccaacggtgttcggaaggacgccgttcta
taa
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