Paraburkholderia phytofirmans OLGA172: AYM40_13930
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Entry
AYM40_13930 CDS
T05111
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AYM40_13930
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
buz01007
]
AYM40_13930
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
buz03016
]
AYM40_13930
Enzymes [BR:
buz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AYM40_13930
Amino acid related enzymes [BR:
buz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AYM40_13930
Transfer RNA biogenesis [BR:
buz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AYM40_13930
Prokaryotic type
AYM40_13930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
tRNA_bind
FDX-ACB
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ANB73338
UniProt:
A0A160FME2
LinkDB
All DBs
Position
1:complement(3189705..3192140)
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AA seq
811 aa
AA seq
DB search
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVEDLRPAAPPTSKIVVGQVLEVVKHPDAD
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAEEGGTPFAIKLSKLRGVE
SQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADCLSVFG
VARETSAITGAPLRPLEIKPVEVKLNETLPVKISAPDLCGRFSGRVIRGVNARAKSPQWM
VQRLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKGETLKLLNGNT
VELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFST
DAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVDDQIVNVPKREPVKMRVSRANRI
IGVKIDADEIAQIFTRLGLEFERDGDTFAVMPPSYRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMLPTNETQRSIHVIRHALAARDYAETVNFSFVDTEWEQDFAGNDKPVRLLNP
IASQLSVMRTTLFGSLINVLRTNLNRRAADRVRVFEAGRVFLHDPSIKAGELTVEGFAQP
KMIGGLAYGPAFEEQWGAQTRAVDYFDVKGDLEAVLAPAVARFVKAEHPALHPGRSASIE
LNGRAVGWIGELHPRWMQKYDLPHAPILFEIEAEALMQRVLPTPADVSKFPPVRRDIAVV
VDQKIEVQALLDELQKAQSEAACKTVQKVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQD
TGGTLQDETVDLAIQTLVERLARVYGARLRG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcccggaatcctggctgagaacctttgtcgacccgcaactgacgaccgatgag
ctgtcgcacgcgttgacgatggcgggtctcgaagtcgaagacctgcggccggccgcgccg
ccgacttcgaagatcgtcgtcggccaggtgctggaagtcgtcaagcacccggacgcggac
aagctcaacgtgtgtcaggtcgacgccggcacgggcgcgacgctgaacatcgtgtgcggt
gcgccgaatgtcgcgccgggcatcaaggtgccggtcgcgctggtcggcgcgcaactgccg
ccggccgaagagggcggcacgccgttcgcaatcaaactttcgaagctgcgtggcgtggaa
agtcaaggcatgctgtgctcggcacgcgaactgaagctctcggaagatcatagcggcctg
atgatcctgccggaagatacgccgatcggccaggacatccgcgaaacgctcaatctcgac
gacacggttttcgaaatcaagctgacgccgaacaaggcggactgcctgtcggtgttcggc
gtggcgcgcgaaacgtcggccatcactggcgcaccgttgcgtccgctcgagatcaagccg
gtcgaagtcaagttgaacgaaacgttgcccgtcaaaatctcggcgcccgatctgtgcggc
cgtttttcgggccgcgtgattcgcggtgtgaatgcgcgcgcgaagtcgccgcaatggatg
gtgcagcgtctcgagcgttcgggtcagcgcagcatttccgcgctcgtcgatatctcgaac
tatgtgatgctcgaactgggccggccgtcgcacgtgttcgatctggacaagatccacggc
ggcatggacgtgcgttggggccgcaagggcgaaacgctcaagctgttgaacggcaacacc
gtcgaactcgatgaaaccgtcggcgtgatcgccgatgaacagcacatcgaaagcctcgcc
ggcatcatgggcggcgacagcacggccgtcacgctcgacactaccaacatctatctcgaa
gccgcgttctggtggccggatagcattcgtggccgctcgcgcaagtacaacttctcgacc
gatgcggggcatcgcttcgaacgtggcgtcgattacgcgaccaccgtcgaacacatcgaa
cgcatcacgcaattgatcctcgatatctgcggcggcgaagccggcccggtcgacgatcag
atcgtcaacgtgccgaagcgtgagccggtgaagatgcgggtctcgcgtgcgaaccgtatc
atcggcgtcaagatcgatgcggacgaaatcgcgcagatcttcacgcgcctcggcctcgag
ttcgaacgcgacggcgatacgttcgcggtgatgccgccgtcgtaccgcttcgatatcgaa
atcgaagaagacctgatcgaagaagtcgcgcgtatctacggcttcgaaaagatccccgcg
cgtccgccggtcgcgaccagcgaaatgctgccgaccaacgaaacgcagcgctcgattcac
gtcatccgtcacgcactcgccgcgcgcgattacgcggaaacggtcaacttcagttttgtg
gacaccgagtgggagcaggacttcgccggcaacgacaagccggtacgtctgctgaatccg
attgcgagccagttgtcggtcatgcgtaccacgctgttcggcagcctgatcaacgtgttg
cgcacgaacctgaaccgtcgcgcggccgatcgtgtgcgcgtgttcgaagcgggccgcgtg
tttctgcacgatccgtcgatcaaggcaggcgagctgacggtcgaaggtttcgcacagccg
aaaatgatcggtggccttgcgtatggtcccgcgttcgaagagcaatggggcgcgcaaacg
cgcgcggtcgactacttcgacgtgaagggcgatctggaagccgtgctcgcgccagccgtg
gcgcgctttgtgaaggcggagcatccggcattgcatccgggccgcagcgcgagtattgaa
ctgaatggccgggcagtgggctggattggcgaattgcatccgcgctggatgcaaaaatat
gatttaccgcatgcgccgattctgtttgaaatcgaagcggaagcattaatgcagcgcgta
ttgccgactccggcggacgtgtctaaattcccgccggtgcgtcgcgatattgcggtggtc
gtcgatcagaaaatcgaggtgcaggcgctgctggacgagctccagaaggctcagtccgaa
gcggcctgcaagaccgtccagaaggttgcgctttttgacgaattccgtccaaaatcaaac
acttccggcggtctggctgctcacgagaaaagccttgcgttccgtgtgaccttgcaagat
actggcgggacccttcaggatgaaacggtcgatttggccattcaaactctggtggaacgt
ctggctcgagtatatggcgcacggttgcgtggataa
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