Paraburkholderia phytofirmans OLGA172: AYM40_15460
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Entry
AYM40_15460 CDS
T05111
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz03030
DNA replication
buz03430
Mismatch repair
buz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM40_15460
03430 Mismatch repair
AYM40_15460
03440 Homologous recombination
AYM40_15460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_15460
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_15460
Enzymes [BR:
buz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM40_15460
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYM40_15460
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYM40_15460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
ATP-synt_DE_N
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANB73598
UniProt:
A0A160FMZ0
LinkDB
All DBs
Position
1:complement(3530749..3531903)
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AA seq
384 aa
AA seq
DB search
MSEQFLPEPALDVPIVFVDLETTGGSTSEHRITEVGVVEIGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDAIAPELFERLNGKLFVAHNASFDRGFLRGEFRRAGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHGLVPSDRHRALADADLIWQFWQRLHSGLVPLD
VLQAQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEGDLPLYVGRSVRVRQRLRSHL
TGERRSSKDMRLAQQVRRVEWRATGGELGAMLAEAQLIATLRPGHNRVPRVTKSDPVDAP
WPFEGPVVFEEREETSHARAFHVVDRWRYLGHAPSLAQAAALHASSAAGPFELSTYRLLQ
SHLSRGLRVMPLSISSGTAVPSLA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttctaccagagccggccctggatgtgccgattgtcttcgtcgacctt
gaaaccaccggtggctcgactagcgagcatcgcatcaccgaagtcggggtggttgaaata
ggaccggccggcgtgtcgcgttggagcagcctggtcgaccctcagcaaccgattccttca
ttcattcaacagctcaccggcattacaaacgcgatggtgcggggcgcgccgacgttcgat
gctatcgcgccagaattgttcgagcgcctgaacggcaaactgttcgtggcgcacaacgcc
agtttcgatcgcggctttctgcgcggggagtttcgccgggccgggcttgcgttcgatccg
gatgtgctgtgcaccgtgcgcctctcacgcgccttgtttccggcggaaaagcgccatgga
ctcgacgcgttggtggagcgtcatggtctcgtcccgtccgatcgtcaccgcgcgctagcc
gatgccgatctgatctggcagttctggcagcgcctgcatagcggtcttgtgccgctggac
gttttgcaggcgcagatcgaacgcaccacccgacgctaccggcttgccggcgacatcact
gaagacctgctcgatactgcgccggccggatgcggtgtgtatgcgttctatggagaaggt
gatctgccgctgtatgtcgggcgaagcgtacgtgtacgtcagcggctgcgttcgcatttg
accggtgagcggcgttcgtcgaaggatatgcggctcgcgcagcaagtacggcgtgtcgag
tggcgcgcgactggcggcgagctgggtgccatgctcgcggaggcgcagttgatcgcgacg
ctgcgccctggccataaccgggtgccgcgtgtcacgaagagcgatccggtggatgcgccc
tggccgttcgaaggtccggtcgtattcgaggagcgggaagaaacgtcgcacgcccgcgca
tttcatgttgtcgaccggtggcgttacctcggacatgcgccctcgctcgcgcaggcggcg
gcgctgcatgcgtcgagcgcagccggcccgttcgagctgtcgacctatcgtcttctgcag
agccatctttcgcgcggcctgcgtgtgatgccgttgagcatctcgagcggcacggcggtc
ccgagtctggcttaa
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