Paraburkholderia phytofirmans OLGA172: AYM40_18300
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Entry
AYM40_18300 CDS
T05111
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYM40_18300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_18300
Enzymes [BR:
buz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AYM40_18300
DNA repair and recombination proteins [BR:
buz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYM40_18300
Prokaryotic type
AYM40_18300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANB74104
UniProt:
A0A160FNL2
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All DBs
Position
1:4169118..4169960
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AA seq
280 aa
AA seq
DB search
MTSASRTRSNPSQASLFGDASATPAVATAQPQQTPAAAGAPPPTLEAQFAALPPAWRAHL
TPFIESDAYAPLCRFVDGERAAGKTVYPADVFRALRLTSPDEVKVVILGQDPYHGEDRGT
PQAHGLAFSVAPNVRTPPSLRNIFKEIAASLGHEPPRHGCLDTWARQGVLLLNTVLTVER
DSAASHAKRGWEKCTDTLIHELAMRHDGLVFMLWGAHAQAKRALLGGKSHYVLEAPHPSP
LSAHRGFLGCGHFASANEYLVKHGRTPIDWRLPDEAQMLA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacctcagcttcccgcacccgctccaatccgtcgcaagcctcgttgttcggcgacgcg
tctgccacgccggccgtcgcaacagcgcagccccagcagacacccgcagccgccggcgca
ccaccgccgacgctcgaagcccaattcgccgccctgcccccggcctggcgcgcacacctt
acgccgttcatcgaaagcgacgcctacgcgccgctgtgccgtttcgtcgacggtgagcgg
gcggccggcaaaaccgtctatcctgccgacgtcttccgggctctgcgcctcaccagtccg
gacgaagtcaaagtcgtgatcctcggccaggacccgtatcacggcgaagaccgcggcacg
ccgcaagcacacggcctggcgttttcagtggcgccgaacgtgcgcacgccgccgtcgctg
cgcaacatcttcaaggaaatcgccgcgagcctcggccacgagccgccgcgtcatggctgc
ctcgacacatgggcccgacagggcgtgctgctgttgaacaccgtgctaaccgtcgagcgc
gattcggccgcgagtcacgcgaaacgcggctgggagaaatgcaccgacacgctgatccac
gaactggccatgcgccacgacggcctcgtattcatgctgtggggcgcccatgcgcaagcc
aagcgcgcgctgctcggcggcaagtcgcattatgtgctggaggcgccgcacccgtcgccg
ctgtcggcgcatcgcggctttctcggctgtgggcactttgcgtcggctaacgaatatctc
gtgaagcacggccgtacgccgatcgattggcgcttgcccgacgaagcgcagatgctggcg
taa
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