KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_20235
Entry
AYM40_20235       CDS       T05111                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
buz  Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:buz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buz03032]
    AYM40_20235
   03036 Chromosome and associated proteins [BR:buz03036]
    AYM40_20235
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_20235
DNA replication proteins [BR:buz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AYM40_20235
Chromosome and associated proteins [BR:buz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AYM40_20235
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AYM40_20235
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: ANB74444
UniProt: A0A160FPE2
LinkDB
Position
1:4598070..4598348
AA seq 92 aa
MNKQELIDAVAGQTGASKAQTGETLDTLLEVIKKSVSKGDAVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgcaggacagaccggcgccagcaaggctcaa
accggtgagacgctggacacgttgcttgaagtgatcaagaagtccgtgtcgaagggtgac
gcggttcagttgatcggcttcggcagcttcggttcgggcaagcgcgcagcacgtacgggt
cgtaaccccaagaccggcgaaactatcaagatcccggctgccaagaccgtcaagtttacg
gctggcaaggcgttcaaggacgcggtcaacaagcgctaa

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