Paraburkholderia phytofirmans OLGA172: AYM40_22150
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Entry
AYM40_22150 CDS
T05111
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
buz03016
]
AYM40_22150
Enzymes [BR:
buz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AYM40_22150
Transfer RNA biogenesis [BR:
buz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYM40_22150
Prokaryotic type
AYM40_22150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ANB75123
UniProt:
A0A167W9P0
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All DBs
Position
2:407869..408681
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AA seq
270 aa
AA seq
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MKRIALGVQYDGSAFCGWQSQPHGKTVQDELERALREFAQTPVQTVVAGRTDTGVHGLGQ
VVHFDTELDRTDFSWIRGTNAFLPKTIAVQWAKPMPDEFHARFSAFERTYYYVLYVHPFR
SPMQATRAGWVHTQLDVDAMRAATVHLIGEYDFSAFRSSQCQAKTPVKHLYQIDILQQGD
FVHFRFRANAFLHHMVRNLMGCLVDIGRGRHPAEWMAEVLASRDRDCAAPTFMPDGLYLA
QVGYPDQFAVPAPQTGAVPWSTVWTEQAQT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcggattgcgctaggcgtccagtacgacgggtcggcattctgcggctggcagtcg
cagccgcacggcaagaccgtgcaggacgaactcgaacgggcgttgcgcgagttcgcgcaa
acgcccgtgcaaaccgttgtggcgggccgcacggatacgggcgtgcacggcctcggccaa
gtcgtgcacttcgacacggaactcgatcgcacagatttttcgtggattcgcggcaccaac
gccttcctgccgaagacgatcgccgtgcagtgggccaagccgatgcccgacgaattccac
gcgcggttttctgcgttcgagcggacttattactatgtgttgtatgtccatccgttccgc
tcgccgatgcaggctacgcgggccggctgggtgcacacgcagctcgacgtcgacgccatg
cgggccgccaccgtccacctgatcggcgagtacgatttttcggcgttccgttcgtcgcaa
tgccaggcgaaaacaccggtcaagcatctgtatcagatcgacatactgcaacagggcgac
ttcgttcatttccgctttcgggcgaacgcgttcctgcaccatatggtgcgcaacctgatg
ggatgtctcgttgacatcggccgggggcgccatccggccgaatggatggccgaggttctc
gccagccgcgatcgcgactgtgccgcgccgactttcatgcctgatggcctgtacctggcg
caggtgggctatcctgatcaattcgccgtgcccgcgccgcaaacaggcgccgtgccgtgg
agtaccgtatggaccgagcaagcgcaaacatga
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