Candidatus Blochmanniella vafra: BVAF_107
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Entry
BVAF_107 CDS
T01398
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bva
Candidatus Blochmanniella vafra
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bva03016
]
BVAF_107 (truB)
Enzymes [BR:
bva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BVAF_107 (truB)
Transfer RNA biogenesis [BR:
bva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BVAF_107 (truB)
Prokaryotic type
BVAF_107 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADV33514
UniProt:
E8Q6S3
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All DBs
Position
120739..121497
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AA seq
252 aa
AA seq
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MKRYLNLSKRQIHGILFLDKPSGFSCNFVLNKIKSFFYVKKIGYAGTLDPLATGMLPICF
GKSTKFATYLSNSDKRYLVSAKLGESTDTFDSDGVIIRVSTVQCSEKKIENCLSSFVGKS
YQIPPMFSAVKYHGVPLYKYARKGICVFRKPREIYVYSLSCINKIDNIIDLDIYCSKGTY
IRSIIHDIGECLGCGAHVIRLRRLMISQYVPDFMIKIKTIEDIFYNTVLNDTEVLNNLDK
LLVAQENLDRFK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatatttaaatttgtctaagagacaaatacatggtattttgtttttagataag
ccatctggattttcttgtaattttgttttaaataaaattaaaagtttcttttatgtaaaa
aagattggatatgctggaactttagatccattagcaacaggcatgttgcctatttgtttt
ggaaaatcgacaaaatttgctacatatttgtcgaattctgataaacgatatttagtttca
gctaaattaggagaaagtactgataccttcgattcagatggagtaattatacgtgtttca
actgttcaatgtagtgaaaaaaaaatagaaaattgtttgagctcttttgtaggtaaatct
tatcaaattcctccaatgttttcagctgtgaaatatcatggggtgcctttatataaatat
gccagaaaaggtatttgtgtatttagaaaacctagagaaatttatgtatacagtttatct
tgtattaataaaatagataatatcattgatttagatatttattgttctaagggaacttat
atacgtagtataatacatgatataggggaatgtttaggatgtggagcacatgttataagg
ttacgtcgattaatgatatcacaatatgtgcctgattttatgataaaaattaaaactata
gaagatattttttataatacagttcttaatgacacggaagtattaaataatcttgataaa
ttgctagtagctcaagaaaatcttgatagattcaaataa
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