Candidatus Blochmanniella vafra: BVAF_109
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Entry
BVAF_109 CDS
T01398
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BVAF_109 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bva03019
]
BVAF_109 (pnp)
03016 Transfer RNA biogenesis [BR:
bva03016
]
BVAF_109 (pnp)
Enzymes [BR:
bva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BVAF_109 (pnp)
Messenger RNA biogenesis [BR:
bva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BVAF_109 (pnp)
Transfer RNA biogenesis [BR:
bva03016
]
Prokaryotic type
tRNA degradation factors
BVAF_109 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH_2
Trep_dent_lipo
S1_2
KH_KhpA-B
Morc6_S5
Motif
Other DBs
NCBI-ProteinID:
ADV33516
UniProt:
E8Q6S5
LinkDB
All DBs
Position
122235..124328
Genome browser
AA seq
697 aa
AA seq
DB search
MINSTIYKFQYGKHTIILDTGTIARQANASVMVSMDDTTVLVTVVGSDQVKIDQDFFPLV
VNYQERTYAAGKFPGGFFRREGRPSESEILTARLIDRPIRPLFPKGFYNDVQIIATVVSV
NPQISPDIVAIIGASAALSLSDIPFLGPIGVARVGYINNQYVLNPTISELANSKLDLVIS
GTESNILMVESESSLLSEKEILNAIIFGHEQQQIVIHNINKLVQEIGKSKFIWKRKELDL
SLQKYLSDLYESRLNCISIVRDRKGRQIQLNNIKQDVIDFSCIKYSNTMNGNEIMYFLNY
LEVQLLRQYILKNNLRLDGRSQDMIREIDIKIGVLPRTHGSALFTRGETQALVAVTLGTE
RNAQNLDELTGDRVDRFLMHYNFNPYCVGEIGIVGAPKRREIGHGRLAKRGMLAVMPDSN
EFPYTIRVVSEITESNGSSSMASICGASLALMDAGVPIKESVAGVAMGLIKEENEFVVLS
DIISDEDHIGDMDFKVAGGKQGITALQMDIKINGITYEIIHVALEKSKLARLKILNFMEQ
VIKIPRKNISEFAPRIYNIKINPDKIKDVIGKGGSVIRALTEETNTIIDIEDDGLIKIVS
LNAEKAKQAMSRIQEITANIAIGSVYTGKVTHIVEFGAFITIFSGKEGLLHISQISEKRI
GKVSDYLKLGQEVLVKVLDIDRQGRIRLSMRGINHMK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
ttgataaattcaactatttataaatttcaatatgggaaacatactataattttagatact
ggcactatagctcgtcaggctaatgcgtcagttatggtaagtatggatgacactactgtt
ttggttactgtagtgggctctgatcaagtgaaaatagatcaagatttttttcctttagtt
gtaaattatcaagaacgtacttatgctgctggtaaatttccaggaggtttttttagaaga
gaaggtagacctagtgagagcgaaattttgactgctcgtttaatagacagaccaatacgt
ccattatttcctaaaggtttttataatgatgttcagataattgctactgtggtttcagta
aatccgcaaatatccccagatattgttgctataataggagcatctgctgctttgagtttg
tctgatattccttttttagggcctataggagtagcaagagttgggtatattaataatcag
tatgttttaaatcctactatttcagaacttgctaatagtaaattagatttggttatttca
ggaactgaatccaatattttgatggttgaatcggaatcgtctttattgagcgaaaaggaa
atattgaatgctattatatttggtcatgaacaacaacaaatagtgattcataacattaat
aaattggttcaagaaattggtaaatctaaatttatttggaaaaggaaagagcttgatttg
tctttacaaaaatatttatctgatttatatgaatcgcgtttaaattgtatttctattgtt
cgagatagaaaaggacgtcaaatacaactaaataatataaaacaagatgttattgatttt
tcttgtatcaaatatagtaatactatgaatggtaatgaaataatgtattttttaaattat
ttagaagtacaattattacgtcaatatattttaaaaaataatttacgtttagatggtcgt
tctcaggacatgattagagaaatagatataaaaattggggtgttacctagaactcatgga
tcagcattatttaccagaggagaaacccaggctttagttgccgttactttaggtactgaa
cgtaatgctcaaaatttagatgaacttacaggggatcgggtagatcggtttttgatgcat
tataattttaatccatattgtgtaggagaaattggtatagtaggagctccaaaaagacgt
gaaataggtcatgggcgtctagcaaaacgaggcatgttggcagtgatgcctgattctaat
gagtttccttatactatacgagtggtatcggaaattactgaatctaatggatcgtcttct
atggcctcgatttgcggagcatctttagcgctgatggatgctggagtgcctattaaagaa
tctgtagcaggagttgctatggggttaataaaagaagagaatgaatttgtagtgttatct
gatattattagcgatgaagatcatattggcgatatggattttaaagttgccgggggtaaa
caaggtattactgcattgcaaatggatattaaaattaatgggattacttatgaaattatt
catgttgctttagagaaatcaaaattagcacgattaaaaattttaaattttatggaacaa
gtaattaagatacctcgtaaaaatatatctgaatttgctcctaggatatataatattaaa
attaatccggataaaattaaggatgtgataggtaaagggggttctgtcattagagcttta
accgaagaaacaaatactattattgatattgaagatgatggattgataaaaatagtttct
ttgaatgcagaaaaggcgaaacaagctatgtctagaattcaagaaattacggctaatatt
gctataggttctgtttatactggaaaagttactcatattgtagaatttggagcatttatt
actatattttcaggaaaagaggggttgttgcatatttctcaaatttcagaaaaaagaatt
ggaaaagtatctgattatttaaaattaggacaagaggtattagtaaaggttttagatatt
gatcggcagggaagaattcgattgagtatgcgtggaattaatcacatgaaatag
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