Candidatus Blochmanniella vafra: BVAF_217
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Entry
BVAF_217 CDS
T01398
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BVAF_217 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bva03021
]
BVAF_217 (rpoA)
03400 DNA repair and recombination proteins [BR:
bva03400
]
BVAF_217 (rpoA)
Enzymes [BR:
bva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BVAF_217 (rpoA)
Transcription machinery [BR:
bva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BVAF_217 (rpoA)
DNA repair and recombination proteins [BR:
bva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BVAF_217 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADV33618
UniProt:
E8Q602
LinkDB
All DBs
Position
240461..241465
Genome browser
AA seq
334 aa
AA seq
DB search
MQSPEKEFLKPRLINIEKISEVHAKITLEPLERGFGHTLGNALRRVLLSSMPGCAVTEVE
IDGVLHEYGIKEGIREDVLEILLNLKTLAIAIEGKDSMILSLKKSGVGPVVASDILYDSS
IVKIVNPAHVICVITDDHAILSMRIKVQRGRGYVPAFSKFNSILDEQQTAIPIGRLVLDA
CYSPVERVSYTVEAARVEKRTDLDKLIIDMETNGTIDPEEAIRRAATILSDQLSTFIDLN
NVYQPEIKEDKPEFDPALLHLVDDLELTVRSANCLKAESIHYIGDLVQKTEVELLKTPNL
GKKSLTEIKDVLASRGLSLGMCLEKWPPKSFTDR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtcctgaaaaggagtttttaaaaccgaggttaataaatatagaaaaaatttct
gaagtacatgccaaaattactttagaaccgttagaaagaggttttggtcatacgttaggg
aatgccttacgtcgtgttttgttatcttctatgcctggatgcgcagtaacagaagttgaa
attgacggagtgttacatgaatatgggataaaagaaggtattcgggaggatgttttagaa
attttgcttaatttaaagacattggcaattgcaattgaaggcaaagatagtatgatatta
tctttaaagaaatctggagtgggtccggtagtggcaagtgatattttgtatgatagcagt
attgttaaaatagttaatccagcacatgttatttgtgttataacagatgatcatgcaatt
ttaagtatgcgtattaaagttcaacgtggtagaggttatgtgccagctttttctaagttt
aattctattcttgatgaacagcagacggcaataccaatcggccgattggtattagatgca
tgttatagtcctgtagaaagagtgtcttacactgtagaggcagctcgagttgaaaagcgt
acagatttagataaattaattattgatatggaaacaaatggaacaatagatcctgaagaa
gctattcgccgagccgctactattttatctgatcaattatctacatttattgatttaaat
aatgtttatcaacctgaaattaaagaagataagccagagtttgatcctgctttattacat
cttgttgatgatttagaattaactgtacgttcagcgaattgtttaaaagctgaatctatt
cactatataggagatttagttcaaaagacagaggtagagttattaaaaactcctaattta
ggaaaaaaatctttaactgaaataaaagatgtattggcttctaggggattatctttgggt
atgtgtttagaaaaatggcctccaaaaagttttactgatcggtaa
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