Candidatus Blochmanniella vafra: BVAF_270
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Entry
BVAF_270 CDS
T01398
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BVAF_270 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bva03400
]
BVAF_270 (recD)
Enzymes [BR:
bva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BVAF_270 (recD)
DNA repair and recombination proteins [BR:
bva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BVAF_270 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
ResIII
SH3_13
FtsK_SpoIIIE
nSTAND3
AAA_7
T2SSE
AAA
AAA_29
AAA_28
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADV33668
UniProt:
E8Q652
LinkDB
All DBs
Position
complement(297099..299036)
Genome browser
AA seq
645 aa
AA seq
DB search
MKNLSKQKSPVKLWNPLDLQFAKILITSVFNSKTHHINNITNIEKTVLLLASTYLSAYVR
LGHTCLPIHILTSDKLHQHYYPPLLLSNFKILQEIKKLSIDDWQEILLSLSAVGNGSYTS
PLVLDNNHLYLYRIWQDECTIAKFFNSSYNHFNRYPSTKIIHIIQQLFPETSSKQVNWHK
IATILSFIHSRVLISGGPGTGKTSTIAKIITALLLYDHNLRIKMIAPTGKSASILTYSCN
NKLNNFNQLNGFFKYKLELKATTVHSVIEHFFIQQKTLTNYSNTLDIDYLIIDESSMLSV
SMLSQLIKILPIHVTVIFSGDHHQLYSIEPGSIFRDVCQFSNFQYSIKRQKELIQLTQYP
DNIFSNANLNSAKNCFYNNISDGICILNQNYRFNKNSGIGQLSSAINLGDYTRTLSILNS
KKYTDLSYIHLKNEKDYITMIKRCSNKYYHYLKNLQYKKIFSINTLKIFDQYRILCAFKH
GIFGVIKLNYFIEQTLTQCGLITLNKSNNYIGRPIIILHNEPSLELCNGDTGILLPDAQN
HLSAYFLLPNNEIKIIKINQLPAHETCFAMTIHKAQGSSFLNTDIILPNEHSTILTRELL
YTAVTRAQLKLTLYATDNVLIRTVSAATQRYSGLFNRIKKACIHY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttatctaaacaaaaatcaccggtaaaactctggaatcctttagatttgcaa
ttcgctaaaatactaatcacttcggtatttaattctaaaactcatcacattaataacatt
acaaatatagaaaaaactgtactactattagctagcacatatttaagtgcttatgttaga
ttagggcatacatgtctacctatacatatactgacttctgataaactacaccaacactac
tacccccccctactactatcaaattttaaaattttacaagaaataaaaaaactatcaata
gatgattggcaagaaattttattatctttatctgcagtaggaaatgggtcgtatacttct
cctttagttttagataataaccatttatatttatatcgaatatggcaagatgaatgcaca
atagctaagttttttaattcttcttataatcattttaatcgatacccgagtaccaaaata
atacatattattcaacaattatttcctgaaacttcttcgaaacaagtaaattggcacaaa
atagctactatccttagttttatacattctagagtattaatctctggaggtcctggaact
ggaaaaacgtcaactatagcaaaaataattacagcactattattatatgatcataatcta
cgtataaaaatgattgccccaacaggaaaatcagcaagcattttaacttactcctgtaat
aataaattaaataattttaatcaactcaatggctttttcaaatataaattagaattaaaa
gctactactgtgcatagtgtaattgagcatttttttatacaacaaaaaaccctcacaaat
tattcaaacactttagatatagattatttaattattgatgaatcttctatgttaagtgta
tctatgttatctcaattaattaaaattttacccatacatgtaacagttattttttcagga
gatcatcatcaattatattcaatagaacctggatctatttttagagatgtatgtcaattt
tctaattttcaatattctataaaacggcagaaagaattgatacaattaactcaatatcct
gataatattttcagcaatgctaatttgaatagtgctaaaaattgtttttataataatatt
tctgatggaatatgtatattaaatcaaaattatagatttaataaaaattcaggaattggc
caattatcgtctgctataaatttaggcgattatacacgaacactctctatccttaattct
aaaaaatatactgatttatcttatatacatctaaaaaatgaaaaagattacataacgatg
attaaaagatgctctaataaatattatcattacctcaaaaatttacaatacaaaaaaata
ttttcaataaacactttgaaaatatttgatcaatatcgaatattatgtgcattcaaacat
ggtatatttggagtaataaaattaaactattttatcgagcaaacccttactcaatgcgga
ttgataactttaaataaatcaaacaattatataggaagaccaataattatattgcataac
gagccatctttagaattatgtaatggagatacgggaattctattacctgatgctcaaaac
catttgtctgcttattttctcttaccgaacaatgaaattaaaatcataaaaataaatcaa
ttaccagcccacgaaacatgttttgctatgaccatacataaagcccaaggctcttcattt
ttaaataccgatattatattgcctaatgaacattccacaatattaacaagagaattacta
tatactgctgttactagagctcaactaaaacttactctatatgcaacagataacgtatta
atacgcactgttagtgctgctactcaacgctacagcggattatttaatagaataaaaaag
gcatgcatacattactaa
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