Candidatus Blochmanniella vafra: BVAF_304
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Entry
BVAF_304 CDS
T01398
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03030
DNA replication
bva03430
Mismatch repair
bva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVAF_304 (dnaX)
03430 Mismatch repair
BVAF_304 (dnaX)
03440 Homologous recombination
BVAF_304 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bva03032
]
BVAF_304 (dnaX)
03400 DNA repair and recombination proteins [BR:
bva03400
]
BVAF_304 (dnaX)
Enzymes [BR:
bva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVAF_304 (dnaX)
DNA replication proteins [BR:
bva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVAF_304 (dnaX)
DNA repair and recombination proteins [BR:
bva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVAF_304 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RCF1-5-like_lid
AAA_14
AAA_30
RuvB_N
AAA_5
AAA_18
AAA_assoc_2
TIP49
AAA_19
ResIII
AAA_16
RNA_helicase
TsaE
PIF1
Zeta_toxin
MetOD2
Motif
Other DBs
NCBI-ProteinID:
ADV33702
UniProt:
E8Q6V5
LinkDB
All DBs
Position
join(341898..343550,343552..344067)
Genome browser
AA seq
722 aa
AA seq
DB search
MTYQILALKWRPKKFSEIVGQAHIIKAMIRSFILNRIHHAYILSGTRGSGKTTIARLFAK
GLNCEIQFASNNDVCGQCKNCLDIESGCFIDLIEIDAASRSKVEETREFLDNMQYAPSQS
QFKIYLIDEAHMLSRHSFNALLKTLEEPPHHVKFILITTDHQKLPETILSRCLQFYLKPL
STSQITTQLQYICNQENININDIHLLELLANSAKGSMRDALNLLEQAIILGDSNHITSDV
INNMLGILDVDDSISLIEDLMNGNINNIMHKIDHYSNIGIDWDHFFSEILTILQKIAINQ
FTSFSTIQQHNTNNKSKNINHRIHNLRTKISPETIQLYYQIFLLGRQELSYAPSYRIGTE
MTILRALAFSPINIQSKKNSNKNDINKFNDNLKYCKNSLPQSTTHLNMLTIPKSKTLIKK
PLISNKIHTNTNTIELQKIQHQHNLSVVDRNLPQNIIPNDNSSNHQLHLGDVTKIFNTHL
VSNKIPSNTVSEILKARSKLINYHDNYNKTIKMKAKSDKNIEFQKKLANILKRFSDINMT
AIPHDSKNIKKNDKNLLIKINSHKSNINTHRVDYYIYLDSKKPLHVIMKDIFQEAVQFDP
WIFQIYQLSLLKPAKQLLLSSWKQIVDDNKLYLNLLTCFQHLYSKDLHNAIQLEISNNLK
MPIKLYIIKNDNFVEKTPIEYLYILYTNKIVQLKQKILIDPNTKIIQSLFNAKFYEEDIQ
IF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaattcttgcattaaaatggagaccaaaaaaattttcagagattgtaggt
caagcacatattataaaggcaatgatacgtagttttattttgaatagaatacatcatgct
tatattttatctggaacaaggggatctggaaaaactacgatagcgagattatttgcaaaa
ggattaaattgtgaaattcaatttgcatctaataatgatgtatgcggtcaatgtaaaaat
tgtttagatattgaatcagggtgttttattgatctgattgaaatagatgcagcatctaga
tctaaagtggaagaaactcgggaatttttagataatatgcaatatgccccgtctcaaagt
caatttaaaatttatttaatagatgaagctcatatgttatctaggcatagttttaatgca
ttacttaaaacattagaagagccacctcatcacgtaaaatttatcttaattactaccgac
catcaaaagttaccagaaactatactatctcgatgcttacagttttatttaaaaccttta
agtacttctcaaattacaactcaattacaatatatttgtaatcaagaaaatattaatata
aatgatatacatttattggaactattggctaattcagcgaaaggcagtatgagagatgct
ttaaatttattagagcaagcaattattttaggggatagtaatcatataacttctgacgtt
attaataatatgcttgggattttagatgtagacgattctatatctttaattgaagattta
atgaacggaaatataaacaatataatgcacaaaattgatcattattccaatataggaata
gattgggatcattttttttctgaaatacttactattcttcaaaaaatagctataaatcaa
tttacttcattttctaccatacaacagcataatacaaataataaatcgaaaaatattaat
catcgtatacataatttaagaacgaagatatctcctgagactatacaattatattatcaa
atatttttactaggtcgacaagaattatcttatgctccaagttatcgcataggaacggaa
atgaccattttaagagcattagctttttctccaatcaatatacaatcaaaaaaaaatagc
aataaaaatgatattaataaatttaacgataatttaaaatattgtaaaaattctttacca
caaagcacaactcatttaaacatgttaactatccctaagagtaaaacacttattaaaaaa
ccgttgatttctaataagattcatacaaatacaaatactatagagttacagaaaatacaa
catcaacataatctttctgtagtagatagaaaccttccccaaaacataatacctaatgat
aattcttccaatcatcaacttcatttaggcgacgtgaccaaaatctttaatacccatctt
gtttccaataaaattccttctaatactgtttctgaaatattaaaagcacgatcaaaatta
attaactatcatgacaattataataaaacaattaaaatgaaggctaaatcagataaaaac
attgaatttcaaaaaaagttagctaatatattaaaacgattttctgatattaatatgaca
gcaattcctcatgactctaaaaatataaaaaaaaatgataaaaatctattaataaaaatt
aattctcacaaatctaatattaatacccatagggtagattattatatctatttagattct
aagaaacctttacatgttattatgaaagatatttttcaagaagcggtacaatttgatcct
tggatatttcaaatatatcagttgtctttattaaagccagctaaacagttacttttaagt
tcttggaaacaaatcgtagatgataataagctttatttaaatttattaacttgttttcaa
catttgtattctaaagatctgcataatgctatacaattagaaattagcaataaccttaaa
atgccgattaaattatatataataaaaaatgataattttgtagaaaaaactccaatagaa
tatttatatatattgtatacaaataaaattgtacaattaaaacaaaaaattttaattgat
ccaaacacaaaaataattcaatctctttttaatgctaaattttatgaagaggatattcaa
attttttaa
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