Candidatus Blochmanniella vafra: BVAF_314
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Entry
BVAF_314 CDS
T01398
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03030
DNA replication
bva03430
Mismatch repair
bva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVAF_314 (holA)
03430 Mismatch repair
BVAF_314 (holA)
03440 Homologous recombination
BVAF_314 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bva03032
]
BVAF_314 (holA)
03400 DNA repair and recombination proteins [BR:
bva03400
]
BVAF_314 (holA)
Enzymes [BR:
bva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVAF_314 (holA)
DNA replication proteins [BR:
bva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVAF_314 (holA)
DNA repair and recombination proteins [BR:
bva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVAF_314 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DurN
Motif
Other DBs
NCBI-ProteinID:
ADV33711
UniProt:
E8Q6W4
LinkDB
All DBs
Position
complement(353747..354769)
Genome browser
AA seq
340 aa
AA seq
DB search
MIWIYPEQLSKKLNKKNKFIYILFGNDLSLLQDSHEDIINTIKKSYDCEHFRIQLDKNYD
WDQIFTLCKETNLFSKLQILSIHFSQDYPISSLKKNVSTLLSLTKDNLVFILIIYKLNQF
IQQNNWIHHLYKQNILLINCITPEYSRLTMWIQNQAKRMQLVIENLACQLLCSYYEGNTI
RLKQILEHLFLIYPDGNLTFDRVKTIIVDSSCFNYNHWIESILMGRKQRANRILNQLDYM
RLNLKILLHKIQHEILIIIRIKYDLIAKKNVLSVLFDKYKIYTQYRRIMLSKAMHRLSLM
QLHKAIFLLTQMELQYYQNYMEVSKIHFELLAEILCYKSA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatttggatatatccagaacaattatctaaaaaattaaacaaaaaaaataaatttata
tatatattatttggaaatgatttatctttactacaagacagtcatgaagacattataaat
acaataaaaaaatcatatgattgtgaacattttcgaatccaattagataagaattatgat
tgggatcaaatttttactttatgtaaagaaactaatctattttcaaaattacaaatatta
tcaatacatttctcacaagattatcctatttcgtctcttaaaaaaaacgtatctactttg
ttatcattgactaaagataatttagtatttattttaataatatataaattaaatcaattt
attcaacaaaataattggattcatcatttgtataaacaaaatattttgttaataaattgt
attaccccagaatattcaagattaacaatgtggatacaaaatcaggctaaacgtatgcaa
ttagttatagaaaatttagcttgtcaattattatgttcctattatgaaggaaataccatt
cgattaaaacaaatattagaacatttatttttaatttatcctgatggaaatttaaccttt
gaccgtgttaaaactataatagttgattcatcttgttttaattataatcattggatagaa
tctattcttatgggaagaaaacaacgtgctaaccgtattttaaatcaattagattatatg
cgtcttaacttgaaaatattactacataaaatacaacatgaaatcttaataataattcga
attaaatatgatttaatagcaaaaaagaatgtattatctgtattgtttgacaaatataaa
atatatactcaatatcgacgtataatgttatcgaaagcaatgcatcgattaagtttgatg
caattacacaaagctatatttttattaactcaaatggaattacagtattatcaaaattat
atggaagtttctaaaatacattttgaattattagcagaaattttatgttataaatctgca
taa
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