Candidatus Blochmanniella vafra: BVAF_620
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Entry
BVAF_620 CDS
T01398
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bva
Candidatus Blochmanniella vafra
Pathway
bva03030
DNA replication
bva03410
Base excision repair
bva03420
Nucleotide excision repair
bva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVAF_620 (polA)
03410 Base excision repair
BVAF_620 (polA)
03420 Nucleotide excision repair
BVAF_620 (polA)
03440 Homologous recombination
BVAF_620 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bva03032
]
BVAF_620 (polA)
03400 DNA repair and recombination proteins [BR:
bva03400
]
BVAF_620 (polA)
Enzymes [BR:
bva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVAF_620 (polA)
DNA replication proteins [BR:
bva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BVAF_620 (polA)
DNA repair and recombination proteins [BR:
bva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BVAF_620 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVAF_620 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADV33991
UniProt:
E8Q796
LinkDB
All DBs
Position
complement(702354..705206)
Genome browser
AA seq
950 aa
AA seq
DB search
MTNIIDNPIILIDGSFYIYRAYHAYPPLTTSTGYPVWVIYGVINMIRSLLIKYRPIHMGI
VFDSPGKTFRNDLFKQYKSNRPQMPEDLCIQITPLNTIIKAMGITALSVPYVEADDVIAT
LSNFYAQLKNKTVLISTGDKDMAQIVSSNIILINTMSNIILDSLEIKKKFGVSPNLIADY
LALIGDRSDNIPGVPGIGIKNAKILLNNIGNLQTLYQNLHKISILNLRNSQSIKNTLIKN
KKLAFLSYKLATVKIDVPLNQSDYKLLIQNIDSQQLFLLFKKYEFNTWVSELQAGTWLKK
YKNTKKSSTQNSQLSNTSLISNTITHTCNYYPSFPSSNNNDIISNISSLTNWIKQNNTHH
CFILNIYSNNFDIFTPNIIGICISTYTMNSMHNAYIPINIQHTLNIDNNNDTYQWYLNLT
EVLSILKPILENIKIKKIGHNMKFIFSLLKQHNIHLSGPIFDVILELYVLYGTSNYQNIK
RFLNKTTILDHIFKFQQIYNNNKYLIKKNIRDIQLESSCSTQLIYAISNLHQILWTEIKQ
HNELKKIFINIEIPLISVLSRIEDYGVLIDKKFLYSHSIKLNSQLNNLKTQAYQLTGSSF
NLDSPKQLQEILYNQEKLPIFKKTPHGAPSTSEEVLKKLSKKHSIPKIILKYRSLSKLKS
TYTNKLISMINKKSNRIHTSYNQTRTSTGRLSSTNPNLQNIPNRNYDGRKIRQAFIAPEN
SLIISADYSQIELRIMAHLSRDLKLINDFLEEKDIHTTTASEIFVTSLHLVTGEQRQRAK
TVNFGLIYGMTAFGLSKQLSVTCQEAQKYVDRYFQRYPGVMQYMQYIKDYAKKNGYVSTL
DGRKLYLPDIYSSNISQKKGAERSAINAPMQGSAADIIKRAMISIDSWLQTDNIPVHMIM
QVHDELVFEVNNTFVDIAVKQIRKLMEECFILNVPLKVDIGVGKNWEQAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattatagataatccaattattttaatagatggatctttttatatatatcga
gcatatcatgcatatccacctttaacaacaagcacaggatatcctgtttgggttatatat
ggagttataaacatgattagaagcttattaataaaatatcgacctattcatatgggtatt
gtatttgactcccccggtaaaacatttcgtaatgatttatttaaacaatataaatcgaat
cgacctcaaatgcccgaagatttatgtattcagattacacctctaaatacaataataaaa
gcaatgggaattaccgcgctaagcgtaccttatgtagaagcagatgatgtaatcgcaaca
ttatctaatttttatgctcaactaaaaaacaaaacagtgttaattagcactggagataaa
gacatggctcaaattgtatcttctaacattattttaataaatactatgtctaatatcata
ttggactctttagaaataaaaaaaaaatttggggtatcacctaatctaatagcagattat
ttagcattaattggagatcgttccgataatattcctggagtaccaggaataggcataaaa
aacgctaaaattttattaaacaacatcggtaacctacaaacactatatcaaaacttacat
aaaatatccattttaaatcttcgaaattcccaatcgataaaaaatacattaattaaaaat
aaaaaattagccttcctttcctataaattagcaactgtgaaaatcgatgttcctttaaac
caatctgactataaattattaatacaaaatattgattcccaacaattatttttattattt
aaaaaatacgaatttaatacttgggtatcagagctacaggcaggtacatggttaaaaaaa
tacaaaaatactaaaaaatcatcaactcaaaattctcaactaagcaacacctctcttatt
tcaaatactataacacatacatgtaactattatccatcattcccatctagtaataataac
gacattatatctaatatttcatcactaacaaattggataaaacaaaataacactcaccac
tgttttatcttgaatatatattcaaataattttgatatttttactcctaatatcattgga
atatgtatatctacatacactatgaattccatgcataacgcatatataccaatcaatatt
caacatactttaaatatagataataataacgatacgtaccaatggtatttaaatctaaca
gaagtattatctattttgaaaccaattttagaaaatataaaaataaaaaaaattggacat
aatatgaaatttattttttctttattaaaacaacataatatacatttatctggaccaatt
tttgatgtaatactagaattatatgtattatatggcacttctaattatcaaaatataaaa
cgttttttaaataaaactacaatattagatcatatttttaaattccaacaaatctataat
aataataaatatcttattaaaaaaaatattagagatatacaattagaatcatcatgttca
acgcaattaatatatgccatatcaaatttacatcaaattttatggacagaaataaaacaa
cataacgaattaaaaaaaatatttataaatatagaaataccattaatatccgttctttct
agaattgaagattatggagtattaatagataaaaaatttttatattctcattcaataaaa
ctaaattctcagctaaacaatttaaaaacacaagcatatcaattaacagggtcttcattt
aatttagattctcccaaacaattacaagaaatcttatataatcaagaaaaattaccaatt
tttaaaaaaactcctcatggagctccttctactagcgaagaagtactaaaaaaattatcc
aaaaaacactctatacccaagattattttaaaatatagaagtttatctaaattaaaatca
acatatactaataaattaatatctatgatcaataaaaagtcaaatcgtatacatacttca
tataatcaaactcgaacttccactggacgactctcttccacaaatcctaatcttcaaaat
attcccaatcgcaattatgacggaagaaaaatacggcaagcctttattgctccagaaaat
tctttaattatatcagcggattactctcaaatagaattaagaattatggctcatttatct
cgcgatctcaaattaattaatgattttcttgaagaaaaagacattcataccacaacagcc
tctgaaatctttgttacgtcattacatttagtgacaggagagcaaagacagcgcgcaaaa
actgttaattttggtttaatttatggtatgactgcttttggattatcaaaacaattatca
gtaacatgtcaagaagctcaaaaatatgtagaccgatattttcaacgctatcctggagtt
atgcaatatatgcaatatattaaggattatgctaaaaaaaatggatacgtatccacttta
gatggccgtaaattatatttaccagatatttactcttctaatatatcccaaaaaaaagga
gccgaaagatcagcaattaatgctcctatgcaaggaagcgctgcagatatcattaaaaga
gcaatgatatctattgattcttggttacaaacagataatatccctgttcacatgattatg
caagtacatgatgaattagtttttgaagtaaataatacatttgtagatattgcagtaaaa
caaattagaaaacttatggaagaatgttttattttaaatgttcctttaaaagtagatatt
ggagttggaaaaaattgggaacaagcccattaa
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integrated database retrieval system
