Bombus vancouverensis nearcticus: 117153334
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Entry
117153334 CDS
T07628
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117153334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117153334
03036 Chromosome and associated proteins [BR:
bvan03036
]
117153334
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117153334
Coactivators
SAGA/TFTC/STAGA complex
117153334
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117153334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
117153334
NCBI-ProteinID:
XP_033183182
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPAVSGHQVSSASVSQQNHQVNSGIS
NGGTITAVQPQKHGVSNGGGATTVNSLMNQEVTKSITTSTLLPVNVVTSNTVAPQVTTQQ
QQQQQQHTQSAVPSAAYINQATTNQVTSNQTTNIPSLTKTHEPVKIIYPTVGQVIATTGV
ANANNKLSFPAQTVGQLANGTLGITSPAVLQTASNVSNVGSVSETGSQTVASVNKPSGAA
LVIKTSVAQSGMVSVPMSVPVSVAGTVSTALQGKAGVTSTIVPSNVQILNVNAMRPATPV
TGQQAGKQVASRVVIGPHMLGTRPGGPGITLQTLHGLQPGTQGHILLKTETGQFQLLRVG
PAPTAGTPGGTTVTPNSIAGNAVVAAPSPGTTYRLASVPAVSRLNTQFTGPPLATLRKSI
QTVAATITTATTTPSTVTAAASSTPTPPVTTVQTVQTSTPRPTTDNTKEKCRKFLANLLE
LSSREPKAVERNVRTLIQELIDTKVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQS
LVTKELVIEGIKPPPANVVFPVTSTTPVVTQQNQLRPTVAVTAATIPVTAVTPTTQVRVM
APLPAATTTVPRPAQPVQQRLIRPVTTAVRSPAPYTVKSTAAITGIRPTVPTIQKPPITT
VVKTVPTITQGKTVNTATTVNKAIVPSFVPKPVTKEKEKKTFSSAGYTGDDDINDVAAMG
GVNLAEESQRILGSTEFVGTQIRSCKDEVFLQMTPLQQRIKQIVSSYGLEEPNQEVAALI
SHAVQERLKNLVEKLAVVAEHRADLIKVDPRYEVTQDVRAQLKFLEDLDKVERRRHEEQE
REILLRAAKSRAKTEDPEQAKLKAKAKEMQRAEMEELRQREANLTALRAIGPRKKPRLDI
GVSVNSPGSNSGLNASATGINRQMPMKPRLKKVNFRDLLFLLEQEKETCRSTMLYKSYLK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctctgagcacggacgtcgatgaatctgcagtg
aacgcgatagtgggctcccttgaaacacaactggtaacatctacgccagctgtatctggt
caccaagtaagttctgcatcagtcagccagcagaatcatcaggtgaacagcggtatttcc
aacgggggcaccatcaccgcggtacaaccacagaaacatggggtttcaaacggtggcggt
gctactacagtaaatagtctgatgaatcaagaagtcacgaagtctattaccacgagtact
cttctccctgtaaacgtggttacctcaaacacagtggcgccacaggttactacacaacag
cagcaacagcagcaacagcatacacagtcagcagtcccctctgctgcttatatcaatcaa
gctactacaaaccaagtgaccagcaatcaaacgacaaatataccaagccttaccaaaaca
catgaacctgtcaaaataatttatcctactgttggtcaagtaattgcaaccacaggggta
gctaatgcaaataacaaactttcttttcctgcacaaactgttggacaattggccaatggt
actttgggaataacttcaccggcagtgttacagacagcatcaaatgtttctaatgttggt
tctgtcagtgaaacaggcagtcaaacagttgctagtgtaaataagccgtcaggtgcagct
ttggtgataaagactagtgtagcacaaagtggcatggtttctgttccaatgtctgttcct
gtttctgtggctggcacagtcagcacagcactacagggtaaagctggagttacatctacg
atagtacccagcaatgtgcaaattcttaatgttaatgcaatgcgacctgccacaccggtg
acaggacaacaagcaggcaagcaagttgcatctagagtagtgattggtccacacatgctt
ggaacaagacctggaggtccagggataacattgcaaacattacatggtcttcaacctgga
actcagggtcatatactattaaaaacagaaactggacagtttcaattactaagggtaggg
ccagctccaacagcaggtacacctggtggtactacagttacaccaaatagtatagcagga
aatgcagtggttgctgcaccatctccgggcactacctatcgcttagcctcagtgccggct
gtaagtaggctgaacacacagttcactggcccaccactcgccacgttaagaaaatctatt
cagactgtggctgcaactattacaacagcaactacaactccatcaacagtaactgctgct
gcttcaagtactcctactccacctgttactactgttcaaacagttcagacatctacacca
cgtccaactacagataataccaaagaaaagtgccgtaaatttttagcaaacttgttagag
ttgtctagtcgagaacctaaagcggtggagcgaaatgttcggactttaatacaagagtta
attgatactaaagttgaacctgaagagttctgtgataggcttgaacgattattaaatgca
tcaccacaaccatgtctgattggatttctcaagaaaagtttgccacttttacgtcaatct
cttgttacaaaagaattggtcatagagggaataaaaccccctccagccaatgttgttttt
cccgtaacatctaccactcctgtagtaacacagcagaatcagcttagaccaactgttgct
gtgacagctgcaacaattcctgtaactgcagttactccaactacacaagtaagagtaatg
gctccactacctgcagctacaactacagtcccacgacctgctcagccagttcaacaaagg
ctgatacgacctgtcacaacagcagttcgtagtcctgcaccatatactgtgaaatcaacg
gcggcgataactgggatacgacctactgtgcctacaattcaaaaaccacctattacaact
gttgttaaaacagttccaaccataacgcaaggcaaaacagtcaacacagccactactgtt
aataaagccatagtgccttcttttgttccaaagccagttactaaagaaaaagaaaaaaag
acattttcgtctgcaggatacacgggagatgacgatatcaatgatgtcgcagctatgggt
ggtgttaatctcgccgaagaatcgcaaaggattcttggttctacagaatttgttggaaca
caaatcagatcctgtaaagatgaagtattcttacaaatgacaccattacagcaaagaata
aaacaaatcgtttccagttatggattagaagaacctaatcaagaagttgcggcgttaata
tctcatgctgtacaagaaaggttaaaaaatttagtagaaaaattagcagtggtagcagaa
catagagccgatttgataaaggtggacccacgttacgaagtaacacaggatgttagggca
caattaaaatttttagaagatttggataaagtggaacgtagaagacatgaagaacaagaa
agagaaatacttttacgtgcggcaaaaagtcgcgcaaaaactgaggatccagaacaagcc
aagttaaaggcaaaagctaaagagatgcaacgtgcagaaatggaggaattaaggcaaagg
gaagcaaacttgacagctttgagagcaatcggtccacgtaagaagcctagacttgacata
ggggtgtctgttaatagtcctggcagtaattctggattgaacgcttcagcgactgggatt
aacagacaaatgccaatgaaaccacgtttaaagaaagtgaatttcagagacttattgttc
cttcttgaacaagaaaaagaaacgtgtaggagcacaatgctctataaatcatacttgaag
tga
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