Bombus vancouverensis nearcticus: 117153459
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Entry
117153459 CDS
T07628
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117153459
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117153459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TOR1L1_C
Motif
Other DBs
NCBI-GeneID:
117153459
NCBI-ProteinID:
XP_033183421
LinkDB
All DBs
Position
Unknown
AA seq
2788 aa
AA seq
DB search
MKNKPIRHKETNTFQFKTFTERVNEIDVDVFHRVAHRNEENDEEIETYFHQTLQKWNYLN
LTEGYCSFKKKVRDIITLPQLVNQKQFVVDTLIEYLAKKDVLFLQPILELVVAMSKDLQK
DFYEYFPRFLTVIIELLKTKDIEQIEYTFTSLAYLFKFLWKYLVKNVKTVLDLLLPLLAD
TQPTYINNFAAESFAFVVRKIKDKDSFLKTVLHILKGNPNIIPGCGKLLFEVISGIPGQF
HSCAEQMLLLYFNGLNNDSLNQSLMFKLLKEIINCMLQSIHSQKCQVLWSVLLNVMDKSI
EETKQFQSKIGKEKSLILLMQLINIIVNHRNGKVVIDPVPLIKKLSHILDTFENEDNVLR
EVINVSVTILLAANVRLMQETSSQILLKVMSVKNIQLLYGAVESLIHYSSFETLVLPHII
RHSIFIGFNDDTLQLFTKIVNAKVPLCLNGINLNKWTKYILDIRGVKSDSINYLQKELEV
LLDNSISTNALKMLIILPHLKPIPAEFKDILKRGILSLYKRILNDTNTETEMIKLCLTFL
ISLESAIHILESETLHQFMEENDIKVLDLIIKYPDNKFILNAVDLCVTYFSTSQYREMYI
NRTVFENLNSSIAEKLSSPFSEIRLIVTHLYLLFSNISEVKLSITNEKKETGVMEHMYLA
ECEPISVHSYRSKLLHLQALSYENEAMINLDLKYYELPLRYLLGNLYINFSLLWGPISKI
IATFAIREYEQFWPIFLTELKCNHEVTVDYKPLFECTVISAIENAVQKCSDKPDYENHKI
LLWKCMTNFSHFCEMKNRDITGLFIDFVNYNFFKSNSEDARCCSILKGQESIVSNNNMEI
DEENESDNESAENQENEKEEKEKKEATISTDTKMKQIDMESRQINKIVISKNYKVKLLLA
QLEVFEKITNPRTLYRESEMQNIYLDLLSSKVPDIQKGALNCLLTYKQKYLIPYKENLLS
IINEKNMKNELTHFKVDKESNIILEEHRNEFIPILMRIIYAKMIAKTGMRTGGKAGGTLK
RKMILRFLSGIQENEMIIFTNMAFKPFKKYMLELDKMNDQQINLKQLTQTIIDTVDLSNI
IPPKRLQSATNLLAILIEQFGSKMGKKLLPYLLGLVICILAEVTGILQKSDQVHVGFLQS
IKNVRSTSISILARFFGHFEDYEWNKYEIDALFNVAVFPWLEKLPIEGIHSPTPLLRLFM
AWSQNSRFYPLFIKYREDNKSVSSLPYIMKLLLGSKTETPVISAIVEMIEKMVTLQDYGK
TNENDMEVDTPFVPLTPILNNLSEINEEALSNGVNYGSTILLPHVFSILQYIKSKLEKST
KGINKSELVILSRISEFVKDAHACDILLTLTLPILTKKAGAGEGEETIIELITTTINLVK
QVKEPTTHVRAILPLLGAISAIPARKLLLELYKTIVEKSTNDCHGILIKNYELVSALNAW
DRRWLDQPDFQKRLDAFSEINNAIEKDEITLEFGIAIIYNCYYILKNEADLALRDNAGQY
LKLLGCKLAQKHKENVADRRYLMDNTILPLIRKGITSKIEIVRLQSIAFLGHLAMECSDV
HPVLRDLSVLTDKADPEVDFFENMQHLQLHRRARAFLKFCNIAKTLKKPFNPRTLTQFVL
PFASSYLCNEAFIHKNSLIDAAIGTVGTICKLLPWHQYEIILKHYLEKLRHSIEFQKQLV
RVIVSILDSFHFDLSKYKFVEESSVLKYNKEIERDHEKEIISDEKKEEESVAKGDDKNNE
KQVEEKLDESLNSENIDTVEETVGKVQNETQKEVPVMEKQIILSQNGARRVVFSISKELL
PQLHCSIIARTSRESSHKINKKRIAIDNEEEELMRVPIALAFVKLLQKLPGHILDANLPG
IFMKLCTFLKSRLESVRRVTREILQKIMITLGPKYLHHLLREMNTLLTKGFQVHVLAFTV
QSVLVALKPYFQKFDINENLQSILSVCKVDLFGLTAEEKEVIGIVKNVSEAKSTKSYDIF
HILAQYITESCLVDLILPLKEVLIRSHSHKTVQKVVECFRNIVLGLADNIFIPLEQMLIF
LYGVISESIPEFKPEKNDKELTEKEVEIHSRQKPDCFIIPPEPKNKMGIKATSKTSKNTN
VHIIIEFGLKLFHILLKRDKISNTEFKSLIDPFVPHISECIKSQHVKLSTLALQCLNWLL
KMDLLSIQETISDICSSIFIILHKYAAAGLSKGDNFDLVMAGFKCMSVIVRDVKQYVISI
DQLKALIMYAEQDMHNTDKQATAFGLLKAIIARKMILPEMHIVMEKVAALSITSELEHVR
VQSRSVFYSYLMEYPLGKHLQKHIAFYLTQVSYEMQPGRLSALEMIYSIVTGFPVKTLVL
KSDIIFIMVGVRLINDDNPICRKLCAKCIKEMITRIPYNNRSKLFDILVTWLKDLKVMHR
TLGAQLCGIFVTVEKDTFKSRLDEILPLLLKQFHADFNDSNEPGRFVKLHTEKEMQLKKE
HYIKDPERMKDHHMFQVLQLLLKISANCTAFLKSEEYKNAIRSFAEYSQSLLAHPHTWVR
LAASQLIGFILAVHDVDKIIDLLENPEKCEAETSYMYSDPTTVIKSLSLDLIAQLQPDMM
LEELADQTVKNLIFIARILKSVKQINTATDQVNEMKDKDKNQLSLPWLVRRLRKAVNIEI
TQAPKSITVRTAFFKWVGGVVATIPMEYLNVILFNIMSPIVREISTTEEKNTILRRLAKE
ASVMIKKRLGSEEYTRLLSRIQQNLDIKKAERKMMRTQQFVTDPELAAKRKIARQQKKKE
AKKRRSDRVTGKKRMKKRARKEVDLDII
NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagccaattcgtcataaagaaacaaatacatttcaatttaaaacatttacc
gaaagagtaaatgaaatcgacgtcgatgtatttcaccgtgttgcacatcgaaacgaggag
aacgatgaagaaatcgaaacgtattttcatcaaacactacagaaatggaattatcttaac
cttactgaaggttactgcagctttaaaaagaaagttcgtgatatcataacgcttccacaa
ttggttaatcaaaagcagtttgtagtagatacattgatagaatatttagcaaagaaagat
gttttgtttctacaaccaatcttagaattagttgttgctatgtctaaagacctacaaaag
gatttttatgaatatttccctagatttttaactgttatcattgagttattaaaaacaaaa
gacatagaacaaatagaatacacattcacatcattagcttatttatttaaatttttatgg
aaatatctggttaaaaatgtaaaaactgtacttgatctgttgctaccattgttggcagat
acacagccaacttatataaacaactttgcagctgaaagttttgcatttgtggtacgtaag
ataaaagataaagattctttcttaaagacagtattgcatatattaaaaggtaacccaaat
ataataccaggatgtggtaaattattgtttgaagtaatatctggtataccaggacaattt
cattcatgtgcagaacaaatgcttttattatacttcaatggattgaataatgattctctc
aatcaaagtttaatgtttaaattattgaaggaaattattaactgtatgctacaaagtata
cactcacagaaatgccaggtactttggtctgtacttttaaatgtcatggacaaatcaatt
gaagagactaagcagtttcaatcaaaaattggaaaagagaaaagtctgattcttttgatg
caattgataaatataattgttaatcatagaaatggaaaagtggttatagatcctgtacct
ctgattaaaaaattgtcacatattttagatacttttgaaaatgaagacaatgtgttacga
gaagttataaatgtatcagttactattcttttggcagccaatgttagattgatgcaggaa
acatctagccaaatattacttaaagttatgtctgtgaaaaatattcaactattatatggt
gctgttgaaagtttaatccattattcatcattcgaaactttggtattgccacatataata
cgacatagcattttcattggttttaatgatgatactttacaactgtttacaaagatagtt
aatgcaaaagttcctttatgtctcaatggtatcaatttaaacaaatggacaaaatacatc
ttagatataagaggtgtaaaatctgatagtattaactacttacagaaggagttagaagtt
ttattggataatagtatatcaacaaatgcattaaaaatgttaattattttgccacatctg
aagcctataccagcagaatttaaggatattttaaaaaggggaatattatctttatataaa
cggatattaaacgataccaatacagaaactgaaatgatcaaattatgtttgacattctta
atatctttagaatccgcaattcacatattggaatcagaaactttgcatcagtttatggaa
gagaatgatataaaagtattagatcttattatcaaatatcctgataataaattcatttta
aatgctgtagatttatgtgtaacatattttagcacatcacaataccgagaaatgtatata
aatcgaactgtgtttgaaaacttaaacagtagtattgcagaaaaattgagttcacccttt
agtgaaattcgcttaatagtaactcatttatatcttttattctccaatattagtgaagta
aaattgtctattacgaatgagaagaaggaaacaggtgttatggaacatatgtatttagca
gaatgtgaacctatatcagtacatagttatcgaagtaaattgctgcatttacaagcattg
tcatatgaaaatgaagcaatgataaatttagatttgaagtattatgaacttccattacga
tatttactaggaaatctgtatataaatttttctttactttggggacctataagtaagatt
atagctacttttgcaatcagggaatatgaacagttttggcctatatttttaactgaatta
aaatgtaatcatgaagtaactgtagactataaaccattatttgaatgtacagttatttct
gcaatagaaaatgctgtgcaaaaatgcagtgacaaaccagactatgaaaatcataaaatt
cttttatggaaatgtatgacaaatttttcacatttctgtgagatgaagaatagagatata
acaggattattcattgattttgtaaattacaacttttttaagtcaaattctgaagatgca
agatgttgcagtatcttaaaaggtcaagaatcaattgtttctaataacaacatggaaatt
gatgaagaaaatgaaagtgataacgaatctgcagaaaatcaagaaaatgagaaagaggaa
aaagaaaaaaaggaagctactatttctacagatacaaaaatgaaacaaatagatatggag
tctagacagataaataagattgtaataagtaagaattataaagtgaagctcttacttgct
caacttgaagtatttgaaaagataacaaatccaagaacattatatagggaatcagagatg
cagaacatttatttagacttgctgtcatcaaaagttcctgacattcaaaagggtgcttta
aattgtcttctcacttataaacagaaatatttaataccttataaggaaaatttgcttagt
ataattaatgaaaaaaacatgaaaaatgaattgacacattttaaagtcgataaagaaagt
aatattatactggaagaacatcgcaatgaatttatacctatattaatgcgtataatttat
gctaaaatgattgcaaaaacaggaatgagaactggtggtaaagctggaggtactttaaaa
cgaaaaatgatcttacgttttctatctggaattcaagagaatgaaatgatcatatttacc
aacatggcatttaagcctttcaagaaatacatgcttgaattagataagatgaatgatcaa
caaattaacttgaaacaacttacacaaactattattgatactgtagatttgagtaacatt
attccacctaaacgtttgcagagtgccacgaatttacttgcaattttaatagaacaattt
ggtagtaagatgggaaagaaattgttaccctacttacttggtttggtaatatgcattctg
gcagaagtaactggaattttacagaaatcagatcaagttcatgttggattcttacaatct
attaaaaatgtaagatccacttccatctcaatattagcaaggttctttggtcactttgaa
gattatgaatggaataaatatgaaatagatgccttgtttaatgtagctgtatttccatgg
ttagagaaattacctatagaaggtattcacagtcctactccattattgaggctgtttatg
gcatggagccagaactcacgtttttatccgttatttataaaatatcgcgaagataataaa
tctgttagttctcttccttacataatgaaacttttattgggttcaaaaactgaaacacct
gttatcagtgctattgttgaaatgattgagaaaatggtaacactacaagactacggaaag
acaaatgaaaatgatatggaagttgatacaccttttgttcctttaacacctatacttaat
aatttatctgaaataaatgaagaagcattatctaatggagttaattatggatctactatt
cttctcccacacgtgttcagtattttacaatatattaaaagtaaacttgaaaaatcaacc
aagggaataaataaatcagaacttgtgattttatcacgtatttcagaattcgtgaaagat
gcacatgcatgtgatatacttcttactcttactttaccaatattgactaaaaaagctgga
gctggagagggagaagaaacgattattgaattgattacaaccacaataaaccttgtaaag
caagtgaaggaaccaacaacgcacgtgcgtgcaattctacctttattaggtgcaatatct
gcaattcctgctcgcaaactcctgttggaactctataaaacaattgtggaaaagtctaca
aacgattgtcatgggatattaataaaaaattatgaattagtaagtgcacttaatgcatgg
gatcgcaggtggctcgatcaaccagattttcaaaaaagattggatgcattttctgaaatt
aataatgcaatagaaaaggatgagattacgttagagtttggcatagctattatttataat
tgttattacattcttaaaaatgaagcagatctagcattaagagataatgcaggacagtat
cttaagctacttggttgtaaattggcacagaaacataaagaaaatgtagcagatagacgt
tatttaatggacaatacaattttaccacttataagaaaagggataactagcaaaattgaa
atcgtaaggcttcaatcaatagcttttttgggacatttggctatggaatgttcagacgtc
catcccgtcttacgagatttatctgtattaactgataaggcggatcccgaagtagatttc
tttgaaaacatgcaacatttgcaactgcacaggagagctcgagcatttcttaaattttgt
aatatagcaaaaacgttgaagaagccgttcaatccgagaacattaacacagtttgtcctt
ccttttgcttcttcatatctatgcaatgaagcttttattcataaaaatagtcttatcgat
gctgcaataggaacagttggtactatatgcaaacttttaccatggcatcaatatgagatt
attctgaaacattacttggaaaagctaagacattctattgaatttcagaaacaacttgtt
agagtcattgttagcattttagattctttccattttgatttgtcaaaatataaatttgta
gaagaatcttcagtactaaaatataacaaagaaattgaaagggatcatgaaaaagaaata
atttctgatgaaaagaaagaagaagaaagtgttgcaaaaggtgatgataaaaataatgaa
aaacaagtagaagagaaattagatgaatctttaaattctgaaaatatagatactgtggaa
gaaactgtaggaaaagtacaaaatgaaacacagaaagaagtacctgtaatggaaaaacag
atcattctttcacagaatggagcacgacgagtcgtatttagtatatccaaggaattgcta
cctcaactccattgttccattatagcgagaacgagtcgcgaaagtagtcacaagattaac
aagaaaagaattgcaatagataacgaggaagaagaactaatgcgagttccaattgctctt
gcttttgttaaattactacagaaattacctgggcatattttagatgctaatttaccagga
atctttatgaagttatgtacattcttgaaatctcgtttagaatctgtacgacgtgttact
cgagaaatattacaaaaaattatgataactcttggcccgaagtatcttcatcatctttta
agagaaatgaatactttattaacaaaaggttttcaagttcatgttctcgcgtttacagta
caatcagtattagtagctctgaaaccatattttcagaaatttgatatcaatgaaaatctt
caaagtattttatctgtatgtaaagtagatctatttggattaacagcagaagagaaagaa
gtaataggaattgtgaaaaacgtatcagaagcaaaatctacaaaaagttatgacatattt
catatattagcacaatatattactgaatcatgtttggtggatttaatcttaccattaaaa
gaagtgcttataagaagtcattcgcataaaactgtgcagaaggttgtggaatgtttcaga
aacatagtactaggtttagctgataatatctttataccattggaacaaatgttaatattc
ctttatggtgtaatttctgaaagtattcctgagtttaagcctgagaagaatgataaagaa
ttaacagaaaaggaagtagaaatacacagtagacagaaaccagattgctttattatacct
ccagaaccaaaaaataaaatgggcataaaggctacttcaaaaacttcaaagaacaccaat
gttcacattatcatagaatttggtttaaaacttttccatattctgttaaaaagagacaaa
atatctaatacagaatttaagtccctgatagatccatttgtaccacacatcagtgaatgc
ataaaatctcaacatgtgaagctaagcacgttagctttacagtgtttaaactggttgctt
aaaatggatttgctttcaatacaagaaacaatttctgatatttgttcatctatctttatt
atcttgcataaatatgctgcagctggcctaagtaaaggagataattttgatttagtgatg
gctggttttaaatgtatgtctgtaattgttcgtgatgtgaaacagtatgtaattagtata
gatcagttgaaagccttaattatgtatgctgaacaagatatgcacaacactgataagcaa
gcaacagcatttggtttactcaaagcgataattgctcgaaaaatgattcttcctgaaatg
catatcgttatggaaaaagttgctgctttaagcattacctctgaactagaacacgttaga
gtacaatctcgctccgttttttattcttatctgatggaatatcctcttggtaaacattta
cagaaacatatagcattttatttgacgcaggttagctatgaaatgcaaccaggtcgtctt
agtgctttagagatgatttacagtattgttacaggatttccagtaaaaactttggtcttg
aagtcggatatcatttttataatggtgggtgtaagattgataaatgatgataatccaata
tgtcgcaagttgtgcgctaaatgtattaaggaaatgattacacgtataccttataataac
agaagcaaactttttgatatacttgtaacgtggttaaaagatcttaaggtaatgcatcga
acgttgggtgctcagttatgcggtatatttgtaacagtagaaaaggacacttttaagtct
cgtttagatgaaatattaccgcttcttttgaaacaatttcatgcagattttaatgatagc
aatgaacctggtcgtttcgtgaagttacatacagaaaaggaaatgcaattaaagaaagag
cattatatcaaagatccagagagaatgaaagatcatcatatgtttcaagtgttgcaattg
ttactaaaaatatcggcaaattgtacggcatttctcaaaagtgaagaatataaaaatgct
attcgttcgtttgctgaatatagtcagtccttattggcacatcctcatacatgggtgcgt
ttagcagcgtctcaactgatcggatttattttagctgttcatgacgttgataaaattata
gaccttttagaaaaccctgaaaaatgtgaagcagaaaccagttacatgtattccgatcct
actaccgttataaaaagtttaagtttagacctaattgcgcaactacagcctgatatgatg
ttagaagaattagccgatcagactgttaaaaatttaatttttatcgcgagaatattaaag
tctgtaaaacagattaatactgctacagatcaagtcaatgaaatgaaagataaagataag
aaccagttatcacttccttggcttgttcgaaggctgagaaaggctgtaaatatagaaata
acccaagctcctaagtcaataacagtgcggactgctttctttaagtgggttggcggtgtt
gtggctacaatacccatggaatatttaaatgtgatactttttaatattatgtcaccaatt
gtgcgtgaaatatctactacagaagaaaaaaataccattttaagacgattagctaaagaa
gcgagtgtgatgattaagaaacgattaggtagcgaagaatatactagattattgagtcga
atacaacagaatttggatattaaaaaagcagaaagaaagatgatgcgtacgcagcagttt
gtaacggatccagaattagctgccaaacgtaaaattgcaagacaacagaaaaagaaagaa
gctaaaaaaaggagatctgacagagtgacagggaagaaaagaatgaaaaaacgcgcaaga
aaagaagtcgatttggatatcatataa
DBGET
integrated database retrieval system
