Bombus vancouverensis nearcticus: 117153569
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Entry
117153569 CDS
T07628
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvan01009
]
117153569
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117153569
Enzymes [BR:
bvan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117153569
Protein phosphatases and associated proteins [BR:
bvan01009
]
HAD phosphatases
Fcp/Scp phosphatases
117153569
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117153569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
117153569
NCBI-ProteinID:
XP_033183622
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MEMSNIRKETFERKKVKKKMSKAQMQLVIIKKKQCDAKALRIVEHLLEPKIDFQWLLTNV
RYINKSHMEDVIEERAIIKLCGYVLCSNALTKIIDQRYHISTTKNKVYDITRRKNFCSSH
CYGASNYLLEQMPTSPLWLRDKEEIPEFKILLNKDELKESMLRDEIHVRDIEMVLNSENT
DEHVQNNKTCKSTENTLLSKSSEVEAHDEYTIKMSPRSSENVAKNIIGKPGILKEFPENG
VKEPVDVKKVSINSEDKGSTAKDYINDNTVKRICTIEANSLLDYTEIQNTTNVNNCATLV
NKDKNQNTENKEQNELLETSGTEDNTTISKYNTVISNKDPIQKIKQNKNKKNKQQNSTKE
NQSNKFYNLAIHIEHNVRNWITEDTISLLLGNEDIKNQLLENIVQHDRYMHLCKKLNKLQ
LEDEKDIHVDLTTNSLKPLPHLCVLQEEGEKMELKVRAFYKGSMIIENHKNTTEVTDQDN
DFTPILPLTEAHAPKILRRRIFLDKLNKILPDLLCALASNKLPQYIYSREKSTLIKALIN
TFSLSAANVIFKTAEWTLVGLIIIKMLSMIDPELKFVLLSKQASMYISMILMSYKLDSNY
LDRLVMELINNTDKQIPV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtctaatattagaaaagaaacttttgaaaggaaaaaagtgaaaaagaagatg
agtaaagcacaaatgcaattagtaataattaaaaagaaacaatgtgatgcaaaagctctt
agaattgttgaacaccttctagaaccaaaaatagatttccaatggcttttgactaatgta
agatatattaacaaaagtcacatggaagatgtaattgaggaaagggctataatcaaatta
tgtggctatgtattatgtagtaatgcattaacaaaaataattgatcaacgataccatata
tcaacaacaaaaaataaggtttatgatataacaaggcgtaaaaatttttgtagttcacat
tgttatggagcttcaaattacttattagaacaaatgcccacgagtccattatggttgaga
gataaagaagaaataccagaatttaaaatattgttaaacaaagacgaattaaaagaaagt
atgcttagagatgaaattcatgtgagagatatagaaatggtactgaattctgaaaacaca
gatgaacatgtacaaaataataaaacatgcaaaagtacagaaaatacacttctcagtaaa
tcttcagaagttgaagcacatgatgaatatacaataaaaatgtccccaagaagtagtgaa
aatgtagcaaaaaatattattggaaaacctggtattttaaaagagtttccagaaaatggt
gttaaggaacctgtagatgtgaagaaagtatctattaattcagaagataaaggtagcact
gctaaagactacataaatgataatactgttaaaagaatatgtaccatagaagctaatagc
ttactagattatacagaaattcaaaatactacaaatgtaaataattgtgctactcttgta
aataaagacaaaaatcaaaatacagaaaataaagaacaaaatgagttacttgaaacatca
ggaacagaggataatacaactatttcaaaatataatactgttattagtaataaagatcct
atacaaaaaataaaacaaaataaaaataaaaaaaataagcaacaaaattctactaaagaa
aatcagtcaaataaattttataatcttgcaattcatattgaacataatgtaaggaattgg
attactgaagatacaatttctttattattaggaaatgaagatattaaaaatcaattgtta
gaaaatatagttcaacatgatagatacatgcatttgtgtaaaaaattaaataaattgcag
ttggaagatgaaaaagacatccatgtagatttaacgacaaattctttaaaaccactacct
catttatgtgttcttcaagaagagggggaaaaaatggaattaaaagttcgggcattttat
aaagggagtatgattatagaaaatcacaaaaacactacagaagttactgatcaggataat
gattttactccaatattacctttaacagaagcacatgcacctaaaatacttcgacgtcga
atatttttagacaaacttaataaaatattacctgacctattatgtgctttagctagtaat
aaattaccacaatatatatacagcagagaaaagagtactttaattaaagcattaattaac
actttctcattgtctgctgcaaatgttatttttaaaacagctgaatggactcttgtgggt
cttattatcattaaaatgttgagcatgatagatcctgagttaaaatttgtattgttaagc
aaacaagcatcaatgtacatctcaatgattttaatgtcatacaagttggattcaaattat
ttagacagactagtaatggaattaattaataatacagataaacaaatacctgtataa
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