Bombus vancouverensis nearcticus: 117153827
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Entry
117153827 CDS
T07628
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117153827
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117153827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
DUF4158
RuvA_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
117153827
NCBI-ProteinID:
XP_033184119
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MICIHNSICTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDCTVLETESIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTSSHSDVSRTASDTLAAEFAEYVTVQGSPPVQSPGYTAR
VEFALKLGYTERLVQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEESDNVADTDL
MSNENSGCSSSLRSVVIDGSNVAMSHGNKEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRKVVEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLRTFPKKSDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVRGSSPNVFLSSNISTNA
FQHQPLCKTKSTVTTSIQPLPSVTKSRSAENVTLDQPMNSTIHGLQVPPTTSSQGYRSSC
RSTGRLNKPEAEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQASQTSSLSQQTAITSSTA
QHRALSRHSSNESAYRAGMNWDRSEGGQCHQHVTRIASAPDSYQAWLSNNSNLAVPSGSS
QRLGASDSQLNVPTSPLYSAMPTDMLRDFLDTRTKIHYHLANIFPEEHVRTAMLIHPFET
DPIEICVAILKMYPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtatacataatagtatttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgaccgtcgccggaaagaaatacgtagat
tgtaccgtcctggaaactgaaagtattgctgacgcagaagattcttcttacgatagcgac
tacgaagctgaagattcagtgggatctacgaatattcattcacaagtggaattgcaggta
tctacgtcaagtcattcagatgtgtcccggaccgcctcagatacgttggctgctgaattt
gcagaatatgttacagtgcaaggaagtccaccggttcagagtccagggtacactgcccga
gtagaattcgcccttaagcttggctacacggaacgtttagttcaaacagcgctggaaaaa
ttgggtccagatccggaacaaaacgaacttttggctgagttgataaaactcggtgctagc
tgttctcaaaaatcagttgatacgccagaggagtctgataacgtcgcggacactgattta
atgtccaatgaaaacagcggatgctctagtagtctcagatctgttgtaattgatggaagc
aatgtggcgatgagtcatggaaacaaggaaatattttcttgtagaggaattaaaatttgc
gtggattggtttaaagctcgagggcacaaagaaattaccgtatttgtgccgaagtggaga
aaggaaacttccaggattgataatccgatcgccgaccaagaaattttgggagaattggaa
agggaccgtttgttggtttttactccatccagattagttggtgggaaaagaatggtttgt
tacgatgatcgctatattttgaaactagcagcggagatcgatggtattgttgtcagcaat
gataattacagagatttggcacaggaaaatccggaatttcgaaaagttgtggaagaaaga
attttgatgtatactttcgtaaatgatcgctttatgccaccagacgatccactaggtaga
agcggtcccactttagacaattttttgagaacttttcccaaaaaatctgatccagcacca
ccttgtccatacgcgaagaaatgcacttatggaaataagtgtaaatttcgacatccagaa
agaggtcttcatcctcaaaaatcagttacagagaagttagtggaacatgtacaaaagcag
cttcaagtaagaggttcaagtccaaatgtatttttatccagcaatatatcgaccaatgcg
tttcaacatcaaccgctttgtaaaaccaaatcaacggtaactaccagtatccaaccatta
ccttcagttacaaaaagcagatctgcagaaaatgtcacgcttgatcaaccaatgaattcc
acgatacatggtttacaagtgccacctaccacaagttctcaaggttatcgttcttcctgt
cgatcgacaggaagattgaataaaccagaagcagagccaccaaatatacataagaaactg
cagaggcagttaactttaaatccagtgtacgatcctcgacttcaccagctgagacaatac
cagcaagcatctcaaacaagttcattatcacaacaaactgcgataacatcttctacagca
cagcacagagccttaagtagacattctagtaacgaatcagcctacagagctggcatgaat
tgggatcgttctgaaggagggcagtgtcatcaacacgtaacacgtattgcttcggcgcct
gattcttaccaagcttggttatcaaataattcaaacttggctgtaccatcaggatcgagt
caacggctgggtgcttcagattcacagttaaatgtccctacatctcccttgtattcggct
atgccgacggatatgttaagggattttctcgataccagaacaaaaatacattaccatttg
gcaaatatctttcccgaagaacacgtgagaactgctatgctaattcatccatttgaaaca
gatccaatagaaatctgtgttgctattttgaaaatgtatccccaataa
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