Bombus vancouverensis nearcticus: 117153882
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Entry
117153882 CDS
T07628
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117153882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117153882
Enzymes [BR:
bvan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117153882
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
HECT type E3
117153882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
PPP1R21_helical
Motif
Other DBs
NCBI-GeneID:
117153882
NCBI-ProteinID:
XP_033184271
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MFKAEEPSRDSFLQQMKAAREERAHEKDREAAVILIQAYVRGWLTRKRILEEFDTNFLND
GGTETNIKLKPALDVYKIIFKFLYIYKKEKVQERIEKLCRYLVLTLDSESPEISYVGLVL
SKDRYISWISQMKTILFYCLTGLDNLKPERVSDHKSIHLRLHTLVSFTSPGTWAIQKVEG
MEKLKAGMNQLCANIMGHLVNKGFYPIMQAFLVKGLGRVEIALKPIALSAAVTLALRPLI
SSQMSDKLVSLFLINIFSVPALVYHLNSISSVCITSFITNNLFARSLELLNSEQNLRIVF
NALEGSYALCLLANLIQLANIERDEVLKELYFPSFTFVVTKMLEACQQYVVAKQSNLTHW
HPILGWLAQKVDTYLQEPIPYVKSQLACLWTGRIVSQLIGQPLTELIEKEIPPSVEQQST
SVGTNIFRRAFLEARTNRNNNTKNYRKLGSAETTRIALICSLYQIALHTLTQMKMEILTG
LCYQDKILYHMYLFLGTLGPHCGLKAFLDHLAANTKCTAPEFQMLILFSDCMTHYVTILD
DMEMYEQQDPFKLSDFVTISYFLNQFLYKAVLNNLFDVPDVKSVPNNPLFTSLHTLLMAI
YRRDCRRTFCPEGHWLAKEVRVSGFLADLEKGRRGAALLLSKMPHVIPHSERVVLFRKHV
ANEKAVLGLTESACNSTPTTLIVVHRTRIVEDGYRQLAMLPSQALKGVIRVRFVNEQGLA
EAGIDQDGVFKEFLEETIKKVFDPSLNLFKVTSENRLYPSPTSSMQDNHLQLFEFVGRML
GKAVYEGIVVDVPFASFFVSQFSGQTGGALYSWLDELASLDRDLYRSLTLVKHYKGDVRQ
LELTFSLDEDVLGKLVTHELVPGGRAVPVTNENKINYIHLMAHFRMHMQIKDQTAAFIKG
FRSIINPEWLALFSTPELQRLISGDNVPLDLRDLRRHTQYYGGFHDSHRVVCWLWDILEK
DFSEEERGLFLKFVTSCSKSPLLGFAHLEPPFSIRCVEVGDDEDTGDTIGSVIRGFFTIR
KKDPQNRLPTSSTCFNLLKLPNYQKKSTLREKLRYAVTSNTGFELS
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagctgaggaaccatccagagacagcttccttcagcaaatgaaggccgctagg
gaagaaagggcccatgagaaagacagagaagctgctgtcattttaattcaggcttatgtt
aggggatggttgacccgtaaaagaatattggaagagtttgatacgaattttctgaatgat
ggtggcacagaaacaaatataaagttaaaacctgctttggacgtgtataagattattttt
aaatttttgtatatatataagaaagaaaaggttcaagaaagaatagaaaagctatgtaga
tatttagtgttgactctagattctgagtctccagaaatttcttatgtaggacttgtatta
agcaaagatcgctatatatcatggatatcacagatgaaaacaatattattttattgtttg
actggtttagataatcttaaaccagaaagagtgtctgaccataaatccatccatttgaga
ttacatacattagttagttttacatcaccaggaacatgggcaattcagaaagtagaagga
atggaaaaactcaaagctggtatgaatcagctttgtgcaaacataatgggccacctagtc
aacaaggggttttatcccattatgcaagcatttctagtaaaaggattgggtagagtggaa
attgctttaaaaccaattgcactttcagcagcagttacattagcactgagaccattaatc
tcctcccagatgtcagataaattggtttcattgtttttaattaatatttttagcgtacct
gcattggtctatcatctgaatagtatatcatcagtatgtattacatcatttattacaaac
aatttatttgcaaggagcctggaattattgaactcggagcaaaatttacgaatagtattt
aatgctctggaaggtagttatgcactgtgtttgttggctaatttaatacagttagctaat
attgaaagagatgaagtgttaaaagaattgtactttccatcttttacgtttgttgtaaca
aaaatgttggaggcatgtcagcaatatgtagttgcaaaacaaagtaatttaactcactgg
catcctattcttggttggcttgcacaaaaggttgatacatatttacaagaacctattcca
tatgttaaatcacaattagcctgtttgtggacaggaagaatagtttcacagttgattggc
caacctttaacagaacttattgaaaaagagatacccccatcagtagaacaacagagtaca
tctgttggtaccaacattttcagaagagcatttttggaagcacgtacaaataggaataat
aacactaaaaattataggaaattgggaagtgcagaaactactagaatagctttaatttgt
tccctttatcaaattgctttacatacacttacacaaatgaaaatggaaatattgactggt
ttatgttatcaagataaaattttataccatatgtatttattcttgggaacactgggtcca
cattgtggtttaaaagcatttttggaccatttagctgctaatacaaaatgtacagcacct
gaatttcaaatgttgatattattttctgattgtatgacacattatgttacaattttagat
gatatggaaatgtatgaacaacaagacccgttcaaacttagcgattttgtaacaatatca
tactttttaaaccaatttctgtataaggcagtgcttaataatttgtttgatgttccagat
gtgaaatcagttcctaataatcccctcttcacctctcttcacacacttttaatggcaatt
taccgccgggattgtagacggaccttttgcccggaaggccactggttggcaaaggaagtt
cgagtgtctggttttctagcagacctggagaaaggcaggcgaggtgccgctcttctcctt
tctaaaatgccgcatgttattcctcattcggagcgtgttgtgctgtttcgtaagcatgtc
gctaacgaaaaagcagttttaggtctaaccgaaagtgcttgcaatagtactccaacaacg
cttattgttgttcacagaactcgtatagtggaggacggatatcgtcaattagcgatgtta
ccctctcaagcacttaaaggcgtaattagagttcgttttgtaaacgagcaaggtttagct
gaagctggtattgaccaagatggagtctttaaagaatttttagaggagacaataaaaaaa
gtttttgacccatctttaaatttatttaaagtcactagtgaaaatcgactttatccatct
ccaacatcatctatgcaagataatcatttgcaactctttgaatttgttggtcgtatgctg
ggtaaagcggtgtacgagggcattgtagtagacgtaccttttgcatctttcttcgtttcc
caattttctgggcaaacaggaggagcattgtacagttggctggacgaattggcttcttta
gatcgagacttgtatcggagtcttactcttgtgaagcattataaaggtgatgttagacag
ttagaattaactttctctcttgatgaagacgttttaggcaaattagttacgcacgaattg
gttcccggaggacgagcagtgccggtcactaatgaaaataaaatcaattatatacactta
atggcccattttagaatgcacatgcaaataaaagatcaaacagcggcttttatcaaaggg
ttccgttctataatcaatcctgaatggttggcattgttttccactccagaattacagaga
ttaatttcgggtgataatgttccactagatttacgagatttacgaagacatacacaatat
tatggtggttttcacgatagtcatcgtgtggtgtgctggctatgggatattctagaaaaa
gatttttctgaggaagaaagaggcttatttttgaagtttgtcacaagttgttcgaaatca
ccattattgggtttcgcacacttagaaccaccattttcgattcgttgcgttgaagttggc
gatgacgaggataccggtgacacaatcggtagcgtaataagaggattttttacgattcgt
aagaaagatccgcagaatcgtctacctacatcgtctacttgctttaatcttcttaaatta
ccaaattatcaaaagaaaagtaccttacgggagaagttacgttacgctgtcactagtaat
acgggcttcgaactttcataa
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