KEGG   Bombus vancouverensis nearcticus: 117154059
Entry
117154059         CDS       T07628                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117154059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bvan03009]
    117154059
Ribosome biogenesis [BR:bvan03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117154059
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML DSE1_N ANAPC4_WD40 WD40_MABP1-WDR62_1st Utp12 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_VPS8 CFAP251_N ASA1 PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_DCAF4 WD40_like Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_SPT8 PAC11 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st MIOS_WD40 PHM7_cyt PROPPIN MIT
Other DBs
NCBI-GeneID: 117154059
NCBI-ProteinID: XP_033184591
LinkDB
Position
Unknown
AA seq 921 aa
MGLTKQYLRYVPGGNLNIIVSSSCNVVFVTLQEQEGRFVAVGACEHVFIWDLRLGEKVQV
LSGEKVNVTYLAASPNKQHLAVGYADGTIKTFDLKTGENTSIFVGHRSEITTLIYDRGGH
RLASGSKDTDIILWDIVAETGICRLTGHKGVITNLAFMKDHNIIISSSKDTFVKFWDLDT
EHNFRTLVGHRTEVWGLVLIKDDQYLITGCNDNELRIWQISFTEGEAVDFDVNLHDLTLT
DDAEISNVKHPLKCEKVGSILRSGHGRVASLNVDATHTVIGCHGLDNTVELFQLLPDTKI
KDNILKRLRKERKKAEKSEKSAETNFSGTPTIKDELIRLPFIKVSAKAKGLSIVMGRSGE
LRVCVGLNNNSIELYSLFTQEKNAEVKHLRSITNHGHRSEVRAVCFSSDNLAFATAAGDS
VKLWNRPTLACLRTVQCNYALTATFVPGDRHLIIGLKDGKMLIIDIASGDILEEIPAHSK
ELWSVTLFPDKKGVASGGGDQTVKFWNFELIQDPDREIKAKVLSVLHLKTLKLEDSVLCV
RISPNSRFVAVALLDSTVKVFFLDTFKFFISLYGHKLPVLCMDISSDSTLIATGSADRNI
KIWGLDFGDCHKSIFAHDDSVSGLSFVPNTHYIFTCGKDGKVKQWDADNFQKIVTLQGHA
GTAWNCAVSPNGLYVISCGSDRVVRLYERTSEPLVLQDEEEEERERQENELATGETTLVP
GQKQQSLPSRKTVSSEKGAELILECLNVSKEYNEQLSQATADKPPAIPLQMQAYNCTNTK
DYLLEIIKRIRGSDLEETLLLLPYSAACEILKMLPTLLQSDYNTELITRLALCLVQAHHG
PIIATQELLPIIETVKTLAIKKVSELRDTIGFNLYGMMHMQRVIEEKEGIQLFIDATQSN
KRKNKIRKNKEKALKRAIMSL
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgggtttaacaaaacaatatttgagatatgtaccaggtgggaatttaaatataattgtt
agttcttcctgtaatgttgtttttgtaacattgcaagaacaagaaggtagatttgtagca
gttggagcatgcgaacatgtttttatatgggatttacgccttggagaaaaggttcaggta
ttatcaggtgaaaaagtaaatgtaacatacttagctgcatctcctaataagcaacatcta
gcagttggttatgcagatggtactataaaaacatttgacttaaaaacaggagaaaataca
agtatatttgttggtcatagatctgaaattacaactttgatatatgatagaggaggacat
agattagcatcaggttcaaaggatacagatattattctttgggatattgtagctgagact
ggtatatgtagattaactggacataaaggtgtaataacaaatttagcattcatgaaagat
cacaatattattattagtagtagtaaagatacatttgtcaaattttgggatttagatact
gaacataattttagaactcttgttggtcatagaacagaagtttggggtttagttttaatt
aaagatgatcaatatttaataactggttgcaatgataatgaactacgtatatggcaaata
tctttcactgaaggtgaagctgtagactttgatgttaatttacatgacttaactctcact
gatgatgctgaaatcagcaatgtgaaacatcctttaaaatgcgaaaaagttggaagtata
ctaagaagtggtcatggaagagttgcgtctctcaatgttgatgctactcatacagttatt
ggatgtcatggtttggacaataccgtagaattatttcaattattacctgacactaaaata
aaagataacattcttaaacgattacgaaaagaaaggaagaaagcagagaaaagtgaaaaa
agtgcagaaacaaatttctcaggaacaccaactataaaggatgaactcatacgcctacct
tttatcaaagtatctgctaaagctaaaggattaagtatagttatgggtagaagcggtgaa
cttagagtatgtgtaggattaaataataattccattgaattatattccttattcacacaa
gaaaaaaatgctgaagtgaaacatttaagatcaataacaaatcatggtcatcgctcagag
gtccgtgctgtttgttttagttctgataatttagcttttgcaacagcagctggtgattct
gtgaaattatggaatagaccaacactggcgtgtttaaggactgtacaatgtaattatgct
ttaacagcaacatttgtaccaggagacagacatttaattataggtttaaaagatggtaaa
atgctaattattgatatcgcttcgggcgacattttagaggaaattcctgcacattctaaa
gaactttggagtgttacattatttcctgataagaaaggagtagctagtggtggcggagat
cagacagtaaaattttggaattttgaacttattcaagatcctgatagagaaataaaagca
aaagttttatctgttttgcacttaaaaactttaaaattggaagatagtgtattatgtgta
agaataagtcccaatagcagatttgttgcagtcgcattacttgattctactgtaaaagtc
tttttccttgatacatttaagtttttcatttccctttatgggcataaattaccagttttg
tgtatggatatatcaagtgattcgacacttattgctactggttctgctgaccgaaatata
aaaatttggggtttagattttggagattgccataaatcgatattcgctcatgatgactct
gtatcaggactttcattcgtacctaatacacattatatttttacttgtgggaaggatggg
aaagtaaaacaatgggatgctgacaattttcaaaaaattgtgacattacaagggcatgca
ggtacagcatggaactgtgctgtttcaccaaatggactttatgttatttcttgtggatct
gatagagtagttaggctatatgaacggacttcagaacctttagttctccaagatgaagaa
gaagaagaacgagaacgtcaagaaaatgaattagctactggagaaactactcttgtccca
ggacaaaaacaacaatctctaccttcaagaaaaacagtatccagtgaaaagggggctgaa
ttgatattagaatgtttaaatgtatctaaagaatacaatgaacaattatcgcaagcaaca
gcagataaaccacctgctattcctttacaaatgcaggcttataattgtacaaatacaaaa
gattatctattagaaataattaaacgaattagaggaagtgatttagaagagacattacta
ttgttaccatactcagctgcttgtgaaattcttaaaatgcttcctacattattacaatca
gattacaacacggaattaattacaagactagcgttatgtttagttcaagctcaccatggt
ccaattatagctactcaagaacttttacctatcatagaaactgtgaaaacacttgcgatt
aaaaaagtttctgaactaagagatacaattggatttaacttgtatggaatgatgcatatg
caacgagttattgaagagaaagagggaatacagctttttatagatgcaacccaaagtaat
aaacgtaaaaataaaattagaaaaaataaagaaaaggcattaaaaagagcaattatgtcg
ttatga

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