Bombus vancouverensis nearcticus: 117154059
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Entry
117154059 CDS
T07628
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117154059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117154059
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117154059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Utp12
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_VPS8
CFAP251_N
ASA1
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_like
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_SPT8
PAC11
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
MIOS_WD40
PHM7_cyt
PROPPIN
MIT
Motif
Other DBs
NCBI-GeneID:
117154059
NCBI-ProteinID:
XP_033184591
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MGLTKQYLRYVPGGNLNIIVSSSCNVVFVTLQEQEGRFVAVGACEHVFIWDLRLGEKVQV
LSGEKVNVTYLAASPNKQHLAVGYADGTIKTFDLKTGENTSIFVGHRSEITTLIYDRGGH
RLASGSKDTDIILWDIVAETGICRLTGHKGVITNLAFMKDHNIIISSSKDTFVKFWDLDT
EHNFRTLVGHRTEVWGLVLIKDDQYLITGCNDNELRIWQISFTEGEAVDFDVNLHDLTLT
DDAEISNVKHPLKCEKVGSILRSGHGRVASLNVDATHTVIGCHGLDNTVELFQLLPDTKI
KDNILKRLRKERKKAEKSEKSAETNFSGTPTIKDELIRLPFIKVSAKAKGLSIVMGRSGE
LRVCVGLNNNSIELYSLFTQEKNAEVKHLRSITNHGHRSEVRAVCFSSDNLAFATAAGDS
VKLWNRPTLACLRTVQCNYALTATFVPGDRHLIIGLKDGKMLIIDIASGDILEEIPAHSK
ELWSVTLFPDKKGVASGGGDQTVKFWNFELIQDPDREIKAKVLSVLHLKTLKLEDSVLCV
RISPNSRFVAVALLDSTVKVFFLDTFKFFISLYGHKLPVLCMDISSDSTLIATGSADRNI
KIWGLDFGDCHKSIFAHDDSVSGLSFVPNTHYIFTCGKDGKVKQWDADNFQKIVTLQGHA
GTAWNCAVSPNGLYVISCGSDRVVRLYERTSEPLVLQDEEEEERERQENELATGETTLVP
GQKQQSLPSRKTVSSEKGAELILECLNVSKEYNEQLSQATADKPPAIPLQMQAYNCTNTK
DYLLEIIKRIRGSDLEETLLLLPYSAACEILKMLPTLLQSDYNTELITRLALCLVQAHHG
PIIATQELLPIIETVKTLAIKKVSELRDTIGFNLYGMMHMQRVIEEKEGIQLFIDATQSN
KRKNKIRKNKEKALKRAIMSL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaacaaaacaatatttgagatatgtaccaggtgggaatttaaatataattgtt
agttcttcctgtaatgttgtttttgtaacattgcaagaacaagaaggtagatttgtagca
gttggagcatgcgaacatgtttttatatgggatttacgccttggagaaaaggttcaggta
ttatcaggtgaaaaagtaaatgtaacatacttagctgcatctcctaataagcaacatcta
gcagttggttatgcagatggtactataaaaacatttgacttaaaaacaggagaaaataca
agtatatttgttggtcatagatctgaaattacaactttgatatatgatagaggaggacat
agattagcatcaggttcaaaggatacagatattattctttgggatattgtagctgagact
ggtatatgtagattaactggacataaaggtgtaataacaaatttagcattcatgaaagat
cacaatattattattagtagtagtaaagatacatttgtcaaattttgggatttagatact
gaacataattttagaactcttgttggtcatagaacagaagtttggggtttagttttaatt
aaagatgatcaatatttaataactggttgcaatgataatgaactacgtatatggcaaata
tctttcactgaaggtgaagctgtagactttgatgttaatttacatgacttaactctcact
gatgatgctgaaatcagcaatgtgaaacatcctttaaaatgcgaaaaagttggaagtata
ctaagaagtggtcatggaagagttgcgtctctcaatgttgatgctactcatacagttatt
ggatgtcatggtttggacaataccgtagaattatttcaattattacctgacactaaaata
aaagataacattcttaaacgattacgaaaagaaaggaagaaagcagagaaaagtgaaaaa
agtgcagaaacaaatttctcaggaacaccaactataaaggatgaactcatacgcctacct
tttatcaaagtatctgctaaagctaaaggattaagtatagttatgggtagaagcggtgaa
cttagagtatgtgtaggattaaataataattccattgaattatattccttattcacacaa
gaaaaaaatgctgaagtgaaacatttaagatcaataacaaatcatggtcatcgctcagag
gtccgtgctgtttgttttagttctgataatttagcttttgcaacagcagctggtgattct
gtgaaattatggaatagaccaacactggcgtgtttaaggactgtacaatgtaattatgct
ttaacagcaacatttgtaccaggagacagacatttaattataggtttaaaagatggtaaa
atgctaattattgatatcgcttcgggcgacattttagaggaaattcctgcacattctaaa
gaactttggagtgttacattatttcctgataagaaaggagtagctagtggtggcggagat
cagacagtaaaattttggaattttgaacttattcaagatcctgatagagaaataaaagca
aaagttttatctgttttgcacttaaaaactttaaaattggaagatagtgtattatgtgta
agaataagtcccaatagcagatttgttgcagtcgcattacttgattctactgtaaaagtc
tttttccttgatacatttaagtttttcatttccctttatgggcataaattaccagttttg
tgtatggatatatcaagtgattcgacacttattgctactggttctgctgaccgaaatata
aaaatttggggtttagattttggagattgccataaatcgatattcgctcatgatgactct
gtatcaggactttcattcgtacctaatacacattatatttttacttgtgggaaggatggg
aaagtaaaacaatgggatgctgacaattttcaaaaaattgtgacattacaagggcatgca
ggtacagcatggaactgtgctgtttcaccaaatggactttatgttatttcttgtggatct
gatagagtagttaggctatatgaacggacttcagaacctttagttctccaagatgaagaa
gaagaagaacgagaacgtcaagaaaatgaattagctactggagaaactactcttgtccca
ggacaaaaacaacaatctctaccttcaagaaaaacagtatccagtgaaaagggggctgaa
ttgatattagaatgtttaaatgtatctaaagaatacaatgaacaattatcgcaagcaaca
gcagataaaccacctgctattcctttacaaatgcaggcttataattgtacaaatacaaaa
gattatctattagaaataattaaacgaattagaggaagtgatttagaagagacattacta
ttgttaccatactcagctgcttgtgaaattcttaaaatgcttcctacattattacaatca
gattacaacacggaattaattacaagactagcgttatgtttagttcaagctcaccatggt
ccaattatagctactcaagaacttttacctatcatagaaactgtgaaaacacttgcgatt
aaaaaagtttctgaactaagagatacaattggatttaacttgtatggaatgatgcatatg
caacgagttattgaagagaaagagggaatacagctttttatagatgcaacccaaagtaat
aaacgtaaaaataaaattagaaaaaataaagaaaaggcattaaaaagagcaattatgtcg
ttatga
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integrated database retrieval system