Bombus vancouverensis nearcticus: 117154083
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Entry
117154083 CDS
T07628
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117154083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117154083
03009 Ribosome biogenesis [BR:
bvan03009
]
117154083
03036 Chromosome and associated proteins [BR:
bvan03036
]
117154083
Enzymes [BR:
bvan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
117154083
Messenger RNA biogenesis [BR:
bvan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
117154083
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
RNase
117154083
Prokaryotic type
rRNA processing factors
117154083
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
117154083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
117154083
NCBI-ProteinID:
XP_033184641
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MANPPPNVGQSYFWGTGVSQPQNMGYYSVPPPNFPPPNFSQPPPSYNIPVSTLPENKGAN
FIPPYHAMGTCYQNEVSNSYDVPYQTPTELQCNNQNYGMSNYSQPVSNFNTNWDDGSAYH
NNDNAEWKSNNYSSDWNKPQSSKNSWYETNKVQEDDRKSSYVKFNDSQKNKRFEWRYRDK
ESSNSYSVSKRRSRSPQNRSRESRSSRSPYRSRHDSQREKYSKYPKNRSVSRERLHCEED
SDRRSIHRKNNLHTSRSQRSYTSYRSRKRSRSQESYSSRTASPNNNPPINRDRTERELLL
EKYRQDYCATSKDIERKMDELSAMGPEGIMENARKVWTRTAPADLYYNRDESNPKIMRGT
PKLQELCELFKKVLLNRAAAARALQPPYEPPPRKTRARLCRHKSEACSSSSSDSDSSMDE
DDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLCRCSAKSRRSGIRHGIYAGEGAINK
CDLNTNNADKLYHYRITISPPTNFLTKTPTIIKHDEHEFIFEGFSMLSHFPLVKLPTCKV
IRFNIEYTILYIDEKLPENFIIEELDYFQTYLFKEILELTDFDLQAAQNKSGCGQFHFMP
RFVRDLADNGQEILSMNEVLNYLIKSSKLLIDPDDLPRLVEMPQYKWQNFADEVKGMIVT
YPGKKPCSVRVDQLDRSQADQPPGVIAYPEIVHFGIRPPQLSYAGNADYQKAWRDYVKFR
HLLANMPKPSFEDKRKLEAKENKLQELRTQSKMKRDVTVDVSSEGFYRTGIMCDIVQHAM
LIPVLVCHLRFHKSLDNLECTLGYEFRNRYLLQLALTHPSYRENFGTNPDHARNSLTNCG
IRQPEYGDRRIHYMNTRKRGINTLINIMSRFGARTETESSIAHNERLEFLGDAVVEFLTS
IHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLNLEEYMLYAHGSDLCHDLELRHAMA
NCFEALMGSLFLDGGIEVADRVFGETLFKTEEDLGKVWVNYPKHPLQEQEPTGDRQWIPS
FELLQKLTKFEESIGIVFTHIRLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSE
YLYKYFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMTQYALYGNPKAELKTKDRADLLEA
FLGALYVDKGLEFCRVFCDVCFFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIP
VYKVIECKGPTNTRVYTVAVYFQGKRLAKASGHSIQEAEMNSAKEALEKSQDLFPQLDHQ
KRVIAKSMKMQQWPNKHKTRGRSMKPTDRHDDSDTSQRSKRSRSEA
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcctcctccaaatgttggtcaatcttatttttggggcacaggagtttctcag
ccgcaaaatatgggatattattcggtgccacccccaaattttccacctccaaattttagt
cagccaccaccatcctataatataccggtctctactttgcctgaaaataaaggtgcaaat
tttattccaccgtatcatgctatgggaacatgttatcaaaatgaagtttcaaattcttat
gatgttccttatcaaactccaacggaactacaatgtaacaatcaaaattatggaatgtct
aactattctcaacctgtaagtaattttaacacaaattgggatgatggaagtgcatatcat
aacaatgacaatgcagaatggaagtccaataactactcgtctgattggaataaaccacaa
agtagcaaaaattcttggtatgaaacaaataaagtgcaagaagatgatagaaaatcatca
tatgtaaaatttaatgattctcaaaaaaataaaaggtttgaatggaggtatagagacaaa
gagtcttctaatagttattcagttagtaaaagacgttccagaagtccacagaataggtca
agggagagtagatcaagcagatcaccatatagatcgaggcatgattcccaaagagagaaa
tattcaaagtatccaaaaaatagatcggtctctagagagcgtttacattgtgaagaagac
tctgacagaagatcaatacacagaaaaaacaatttacatacttcacgctctcagagatca
tatacaagttatagaagtaggaagagatctagatctcaagaatcttactcatctagaact
gctagtccaaataataatccccccattaacagggatagaactgaaagagagttacttcta
gaaaaatataggcaagactattgtgcaacaagtaaggatatagaaaggaaaatggatgaa
ctatctgcaatgggacctgaaggtatcatggaaaatgcaagaaaagtatggacacgtact
gcaccagcagatttatattataatagagatgaaagcaacccaaaaataatgagaggtaca
cctaaactgcaagagttatgtgaattatttaagaaagtattactaaatagagctgcagct
gcaagagctttacagcctccttatgaaccacccccaagaaaaactagagctcgtttatgc
aggcacaaatctgaagcttgtagtagctcttcttctgacagtgatagttcaatggatgaa
gatgacagaacaatggaagaattaatggcaaagaaacaacatccacaaagattacatccc
gaaatgtggtttaatgatccaggagaaatgaatgatggaccattgtgtaggtgtagcgca
aaatcaagaaggtccggtattagacatggaatctatgctggagagggtgcaataaataaa
tgtgatttaaatacaaataatgctgataaattatatcattatcgaataacaattagcccc
ccaacgaactttcttactaaaacaccaacaattattaagcatgatgagcacgaatttata
tttgaagggttttctatgctctcacattttcctctcgtaaaattaccgacttgtaaagta
ataagatttaacattgagtatacaatcctttacatagatgagaagttgccagaaaatttt
attattgaagaattggactatttccaaacttatttatttaaagaaatattagaacttaca
gactttgatttacaagctgcacaaaataaatcaggttgtggtcagtttcattttatgcca
agattcgttcgcgatttagctgacaatggacaggaaatactatccatgaatgaggtttta
aattacttaatcaaaagtagtaaattgttaatagatccagacgatctacctaggttagta
gagatgccccaatataaatggcaaaattttgcggacgaagtaaagggtatgattgttaca
tatcctggaaaaaaaccatgcagtgttcgtgtagatcagttagataggagccaagcagat
cagccacctggtgtaattgcgtaccctgaaattgtacattttggaattagaccaccacaa
cttagttatgcaggaaatgcagattaccaaaaagcttggcgtgactatgtaaaatttcgt
catttattggctaatatgccaaaaccatcgtttgaagataaacgaaagttagaagcaaaa
gagaataagctccaggaattaagaacccaaagcaaaatgaaacgtgatgttactgtggat
gttagttctgaaggattttatagaactggaataatgtgtgatatagtacaacatgcaatg
ttaattccagtacttgtttgtcatttaagatttcataaatctttagataacttagagtgt
accttaggctatgaatttagaaacagatatcttcttcagttagctctaacgcatcctagt
taccgtgaaaattttggtacaaatccagatcatgcacggaattctttgactaattgtgga
ataagacaaccggaatatggtgatcggcgaatacattatatgaatactcgaaaacgtggt
attaatacattaatcaatataatgtcaagatttggtgcgagaaccgaaactgaatcttca
atagcgcacaatgaaaggttggagttcttaggagatgcagtagtagaatttctaacatcg
attcatttatttcatatgtttcctgacttagaagaaggtggtttggctacttacagagca
gcaattgttcaaaatcaacacctcgctgtattagcaaagaaattaaatctagaggaatac
atgctctacgcacacggaagtgatctttgtcatgatttagaattacgacatgcaatggca
aattgttttgaggcattaatgggttcattatttcttgatggtggtatagaagttgcagat
agagtttttggcgaaacacttttcaagactgaagaagatctcggaaaagtttgggtaaat
tacccaaagcatcctttgcaagagcaggaaccaacaggtgatagacaatggataccaagt
tttgaactattgcaaaaattaacaaaatttgaagaatctattggtattgtgtttactcat
atccgtcttttggctagagcatttaccgatcgcagtataggatacacgaacttaacgctg
ggttctaatcaacgtttagaatttttaggagacactgtattacaattgatagtttccgaa
tatttatacaaatattttccagaacatcatgaagggcatctatctttattacgaagttct
cttgtaaataataaaactcaagctgtagtatgtgatgatttggggatgactcagtatgca
ctttatggtaatccaaaagccgaattaaagacaaaagacagggcagatttattggaagcg
tttctgggagctctttacgtcgataagggcttagaattttgtcgtgtcttttgtgacgta
tgtttcttcccacgtttacaagatttcattatgaatcaagattggaatgatccaaagagt
aaattgcagcaatgttgcttaacattaagaacaatggatggtggagaacctgatattcct
gtatacaaagtgattgagtgtaaaggaccaacaaatacaagagtttataccgttgctgta
tatttccaaggaaaacgattagcaaaggcatcaggtcatagtattcaagaagcagagatg
aattcagcaaaagaagctttagaaaaatctcaagatttgtttccacagctagatcatcaa
aaacgtgtaatagcgaagagtatgaaaatgcaacagtggccaaataaacataaaacaagg
ggaagatccatgaaacctacagatagacacgatgattctgatactagtcagcgatctaaa
agaagccgtagcgaagcgtaa
DBGET
integrated database retrieval system
