Bombus vancouverensis nearcticus: 117154165
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Entry
117154165 CDS
T07628
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03082
ATP-dependent chromatin remodeling
bvan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117154165
03083 Polycomb repressive complex
117154165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvan03036
]
117154165
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117154165
Histone modification proteins
HAT complexes
HATB complex
117154165
HDAC complexes
Sin3A-HDAC complex
117154165
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117154165
PRC2.2
117154165
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117154165
Heterochromatin formation proteins
Other heterochromatin formation proteins
117154165
Chromatin remodeling factors
NuRD complex
117154165
NuRF complex
117154165
NuRF complex (fruit fly)
117154165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
YqbF
Motif
Other DBs
NCBI-GeneID:
117154165
NCBI-ProteinID:
XP_033184794
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINAPPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEAGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaagacggtgaaacttttgacgatgctgtggaagaaagagttatcaatgaa
gaatataaaatatggaaaaaaaatactccgtttttatatgatcttgtgatgacacatgct
ttagaatggccatctttaactgctcaatggttaccagatgtaactagaccagaaggaaag
gattattctgtacatcgtcttattttgggcactcatacttcggacgaacaaaatcattta
cttatagctagtgtacaattaccgaatgaggatgctcaatttgatgcatctcactatgat
aatgagaaaggagaatttggaggatttggttctgttagcggaaagatagaaattgaaata
aaaataaatcacgaaggagaggtaaatagagcacgatatatgccacaaaacccgtgtgta
attgcaaccaaaacaccatctagcgatgtccttgttttcgattatacaaaacatccaagt
aaaccagatcctaatggtgaatgccagcctgatctaagactaaggggacaccaaaaagaa
ggatatggtctatcatggaatccaaacttgaatggatatttgctcagtgcatctgatgat
catacaatttgtttatgggatattaatgcaccccctaaagaaaatcgtgtgatagatgca
aaaacaatctttactggacatactgctgtcgttgaggatgtggcttggcatctgttacat
gaatctttatttggatctgtcgcggatgatcagaaattgatgatctgggacacaagatgt
aataataccagtaaaccaagtcatacagttgatgctcacactgccgaagtgaattgcttg
agttttaatccatattcggaatttatacttgcgactggcagtgccgataaaacagtagcg
ctttgggacttgaggaatcttaaattaaaattacattctttcgaatctcacaaagacgag
atctttcaagttcagtggtcaccgcataacgagacgatattagctagtagcggtacagac
aggcgtcttcatgtgtgggatcttagtaaaattggcgaggagcaatccagcgaagatgct
gaagatggaccacccgagttactgtttattcatggtggtcataccgcaaaaattagtgat
ttttcgtggaatccaaatgagccttgggtcatatgttctgtatcggaagacaatataatg
caagtgtggcaaatggcggaaaatatttacaatgatgaagaaccagacacaccagcgagt
gaattagaagctggtgcttcataa
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