Bombus vancouverensis nearcticus: 117154193
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Entry
117154193 CDS
T07628
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117154193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117154193
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117154193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
117154193
NCBI-ProteinID:
XP_033184852
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSFGTGFGGTTSTPAPAFSFGATASTTATPVKPAGFGTPSFGFSTPATSAPSLFGSSSTP
ATGGFGSGTTFGTPAATGFGNTATGGFASAPTFAASATSFGTTPVFGTPASSGTAFGTTS
AFGSTPASTTGFGTFGTTTTSSLGFGGFSGFGTTTTTSAPSLFGGFGTTSTAPTFGTSTG
FGAFGAKPTATTTTTGFGGFGTGTGFAGFGSGLAQTQQQFQQQQQQQQPVNTISEALYNA
VFNCQLYNDERDNIIARWNLIQALWGTGKAYYYMNAPPIELNQENPLCRFKAIGYSRMPD
ADNNDGLVVLCFNKKKKDVKEGEAQLIGFMNNILGNKPNLSLTIDNIKATGEDKSQVTIF
ITEKGITGAPRKIPASELVAYLSQPMQKQQLVQNGVEDMLPLVKLDPAQLKEYLDNPPCS
IDPRLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQEEETTRHRNFLDMAADEIQRLQR
QHTAIQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFESMHSQVSA
PTQFKGRISEMLSQLRMRNHIDTQNQERYAMDPIAQDDIKAYLTMEQQGMAQLIATINSD
LESLKIIKDGMSELLMSHNIS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtacgggattcggaggaacaacttcgacacccgctcctgcgtttagcttt
ggtgcaacggcttccactacggcgacaccagtaaaaccggcagggtttggaacgccatct
tttggatttagtacgccggctacctcagcgccaagtctcttcggttcctcttcaactcca
gcaacaggaggatttggaagtggtaccacttttggtacaccagctgcaactggttttggc
aacacagcaacaggtggttttgcctcggcacctacttttgctgcttccgctactagtttt
ggaactactccagtgtttggtacgcctgcttcatcgggcactgcattcggcaccacttct
gcttttggtagcacaccagcctctaccactggattcggtacatttggaaccactacaaca
tcctctttaggctttggtggtttcagtggatttgggactacaacaaccacctctgcgcct
tccctctttggaggatttggtactacaagtacagcccctacttttggtacatctacaggt
tttggtgctttcggcgcaaaaccaacggcaacaactacaaccactggctttggtggtttt
ggtacaggtacaggatttgcggggtttggatctgggttagcacagactcaacaacagttt
cagcaacaacaacagcagcaacagcccgttaataccatatccgaagcgttatacaatgcc
gtatttaattgccagttatataacgatgaacgtgacaatattatcgcgagatggaacctc
atacaagctttatggggaactggaaaagcttattattatatgaatgctccacctatagag
cttaatcaagaaaatccactatgtagattcaaagctatcgggtacagtcggatgcccgat
gctgataacaacgacggtctggtagtactctgtttcaataaaaagaaaaaggatgttaaa
gagggcgaggcacaattgatcggttttatgaataatattttgggaaataaaccgaattta
tcgcttacaatagacaatattaaagcaactggagaagacaaaagtcaggtgaccattttt
atcactgaaaaaggaattaccggagctccaagaaaaatccctgccagcgagttagttgcg
tatttatcgcaaccgatgcaaaagcaacaattagtgcaaaatggtgtagaagatatgtta
cctttagtaaaattagatcctgcacagcttaaggaatacttagacaatccgccttgttca
atcgatccacgattatggaaacaggctcaactggacaatcccaatccagaactttatata
cctgtgccaatgatcggcttccaacaagttaaacacaggttaaagtgtcaagaagaagaa
acaacaaggcatagaaatttcctagacatggcggctgatgaaatacaaagattacagaga
caacatacggcgatacaagctagattaaaggaacatcggaggactctgttagaactacaa
cacagggtgttgcaggtactggtacgtcaagaaattacacgtaaagttgggttgtctctg
caaccggaggaagaagttctaacacgtaggttcgaatctatgcattcccaagttagcgct
ccaactcagttcaaaggtagaattagtgaaatgctttctcaattgagaatgagaaatcat
atagacacgcaaaatcaggaaaggtatgcgatggaccccatagcacaggatgacataaaa
gcgtacctaacaatggagcaacagggcatggcacaacttatagcaacgataaactccgat
ctagaaagtttgaaaatcattaaagacggcatgtctgaactcttaatgagtcataatata
tcgtga
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