Entry
Name
(RefSeq) DNA ligase 1 isoform X1
KO
Organism
bvan Bombus vancouverensis nearcticus
Pathway
Brite
KEGG Orthology (KO) [BR:bvan00001 ]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117154232
03410 Base excision repair
117154232
03420 Nucleotide excision repair
117154232
03430 Mismatch repair
117154232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:bvan03032 ]
117154232
03400 DNA repair and recombination proteins [BR:bvan03400 ]
117154232
Enzymes [BR:bvan01000 ]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117154232
6.5.1.6 DNA ligase (ATP or NAD+)
117154232
6.5.1.7 DNA ligase (ATP, ADP or GTP)
117154232
DNA replication proteins [BR:bvan03032 ]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117154232
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117154232
DNA repair and recombination proteins [BR:bvan03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117154232
NER (nucleotide excision repair)
Other NER factors
117154232
MMR (mismatch excision repair)
Other MMR factors
117154232
BRITE hierarchy
SSDB
Ortholog Paralog GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
Unknown
AA seq
954 aa AA seq DB search
MYTRIAFNLRSIVFNNIYSRPVIFLSKQFQLNNAFSPIVNNVLNRILANSKIVKNGDQSN
SGNPKRKRDDSGDSSETASPPIGNSSRKKSVSKSPLPLKKENGTPKIKLSPIATTKEKEK
RKSKTPHTATKKKRKANEVKSTPKKSDAKKKLKDVSSDEDQKENELTVEKKTETSDEFES
SKSSPKESKTKKNVKSSEKKATKKRSRIIAPVDSSDEEEHNLLPESPKKANLDVEENNPV
NEEENSDEDVLDNQKDSEEEEKKKEANVEKPAKKIHNFFAPKKKESTNNTDKDKKKSSSH
SYKPSASKYDPINDAFWKQGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSP
DDLLPSIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAE
GSRSNQRTMFQPAPLTVSIVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIR
SLAGKLRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLK
TTYCECPNYDKIIPVLLKEGIEELPNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFT
CEWKYDGERAQIHLAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGEEVKSCILDCEAVA
WDNENKQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKK
NFKEVIGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLK
LKKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFSEED
LQKHTEFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDP
EKGISLRFPRFVRIRDDKNNEDATSAQQVANMYNSQEQIKNQTSSTKVAEEDFY
NT seq
2865 nt NT seq +upstream nt +downstream nt
atgtatactcgtattgcgttcaatttgagatcaattgtattcaataatatttattcgcga
cctgtgatatttttaagtaaacaattccaattgaataatgctttttcccctattgtaaat
aatgttcttaatcggatactcgctaatagcaaaattgtaaagaatggagaccaaagcaat
tcgggtaaccctaaacgaaaaagagacgatagtggagatagcagtgaaactgccagtcca
cctattggaaattcctcaaggaagaaatcagtctcaaaatctccgttaccactaaagaaa
gaaaatggaacaccaaaaattaagctatcaccaatagcaacaactaaggaaaaggaaaaa
agaaaaagtaaaactccacatactgctactaaaaagaaaagaaaagccaatgaagtaaaa
agtacccctaagaagagcgatgcaaagaagaaattgaaagatgtgtcaagtgatgaggac
cagaaagaaaatgagttgactgtagaaaagaaaacagaaacaagtgatgaatttgaatct
tcaaagtcttcgcctaaggaatctaaaactaaaaagaatgttaaaagtagtgaaaaaaaa
gctactaaaaaaaggtcaaggataatagcacctgttgattccagtgacgaagaagaacat
aatctgttgccagaaagtcccaaaaaagcaaatcttgatgtggaggaaaataacccagtt
aacgaagaagaaaattctgacgaggatgttctagataatcaaaaagacagtgaagaagaa
gaaaagaaaaaagaggctaacgtagagaagcctgcgaaaaagatacataatttttttgct
ccaaaaaagaaagaaagtacaaataatactgataaagataagaaaaagtcctccagtcac
tcttataaacctagtgcctcgaaatatgacccaataaatgatgcattttggaaacaggga
gaaaaggtaccatatattgcgttgacacgtacgttggaattgattgaagatacaagcgct
cgattaaaaataatagaaattttatcaaattatttccgatctgtaatagttttaagccca
gatgacttacttccaagcatatatttatgtctcaatcaattagcacctgcttatgaaggg
attgaattaggggtggcagaaacaaatttgatgaaagctatagcgcaatgtactggtaga
acattagctcaaattaaagcagacgtccaaacagttggggatttaggcatcgtggcagaa
ggaagtcgttccaatcaaagaactatgtttcaacctgctccactgacagtatcgattgta
tatactaggctgaaagagatcgcacaaatgactggttctgcgtctttaactaaaaaattg
gataaaattcaatcgctttttgtagcgtgtcgttttactgaagccagatacctcattcgg
tccctagccggcaaacttcgaattggtctagcagaacaatctgtgttacaagctttggca
ctagcgtgtactatgacaccaccaatacaaagttatccaccggaagttttagacgtgagt
aagaaaatgtcaagcgatgcctttaaacaaaagtacgacgaaactgcgcttactcttaaa
acaacatattgtgaatgtccaaattatgacaaaataattcctgttttactaaaagagggg
attgaagaattaccgaacaaatgtaaaattacacctggcatacctatgaaaccaatgttg
gcacatcctactaaaggtgtgcaagaagtattaacgcgtttcgatggattgaaatttact
tgtgaatggaagtacgatggagaaagagcgcagattcatttagccgaggatggtaaaatt
agtatttacagtaggaatcaagaaaataataccagcaaatatcctgatattataggaaga
tttaaaaatactcaaggcgaagaagttaaaagttgtatccttgactgtgaagcagtagcc
tgggataacgagaataaacaaatcctacctttccaaatactcagtacaagaaaacgcaag
gatgcgaacgaagcagatattaaagttcaagtatgtgtgttcatgtttgatttattgtat
ttaaatggagaaccactagtacaacaacctttcataaaacgtcgtgaattattgaaaaag
aatttcaaagaagtaattggagaatggaaatttgcaactagtttagatacttcgactatg
gaacaagtgcaagatttcttagatgaatcagtcaaaggcaattgcgagggccttatggtg
aagaccttagaacaggatgcaacatatgagattgctaagcgttctcggaattggttaaaa
ttgaagaaagattatttagaaggtgtgggtgatacattagacgtggttgtcattggtggc
tatatagggaaaggaaaaaggacaggaacctatggaggatttcttttagcttgttatgat
caagagaatgaggaatatcaaagtgtttgtaagattggtactggattcagtgaagaagac
cttcaaaagcacacagagttcttcaaagaacatataataccacaaactaagtcctactat
cgttatgactcgtctctcgaacctgatcactggttcgaaccagttcaagtgtgggaaatt
aaatgtgcagatctttctttgtcacctgttcataaggcagccgttggtattattgatcca
gagaaaggaatatctttgcgatttccacgttttgtccgcattcgcgatgataaaaacaat
gaggatgctacctcagcgcaacaagttgcaaatatgtacaacagtcaagagcagataaaa
aatcagacatcatcaacaaaagtagctgaagaagacttttattga