Bombus vancouverensis nearcticus: 117154418
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Entry
117154418 CDS
T07628
Name
(RefSeq) nuclear pore complex protein Nup160 homolog isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117154418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117154418
03036 Chromosome and associated proteins [BR:
bvan03036
]
117154418
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117154418
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117154418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
117154418
NCBI-ProteinID:
XP_033185274
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MEEFPLGYREVVPDQTVPEKWNEITLNTGGSQSTLQDIKVPERAGGYSYNDGSKYFTRNR
FIYWRICHDVLELVEHSLDINLANCRVRYKFTDTPILDGISIHETINSVIILIATVSSVH
KLSFPHPERIHKNEHSLSTYKDLGTQSIFSEMSAQNVKRTKEDPHMFHVITNAGTTNSPV
PHAAASWLIPPQEALFALAYNSGTILLLRLDTKTGLVHSSELKQDSIVPRFLSGIATAFR
GRNSEAHVAMSLTIHSCESDTYLFALCREGNIRMWSCNKAQCVAVTDTAIDNRIASQGAQ
GHILRKALGPNNELYLGTFLKFSTRCEFSILKPIQDNGMFKFVRLCTKFAQDQHLVDFFF
TTTRLWAVWRTTDMDTVEVTHAQLSLSGGRVNSEWEAAILEQTPDRDYILSDADTDPRQA
YINYIFHPGQFSLADITKALNIYKRSNFLEDKILSAAELKERVCIAVEAEIQAEIMDYEL
MDEDYLEIANRCWSKFYSWVIQYHANSTRPVGLLLLPSVYGVVLLKKSCFSLLRPMEALE
YLMFCNERSYTSRFKTTPVLSQDEDICQDLITLMSALVLLEEQLPEETKTAVKRELYHLK
SPDTIIDDLLSKLMLESEEPISNFVTHHLSCHKLSNVRDISSAMAMLLETLTYDLGQPNK
VHLNDDHDASILLLNINHFFSSHLGISAISKSVAQITQLRFAICRNLLILQQMILLRPEL
FDSRSLHSIKSSLAPKTVVLMQAYYVVTWICESTALPMPVQSLLDSSVQRLALLKLVDSR
ANIGFKQHRSSSLLELFIENSGAKHAHNLMAHTNLDATSLIPWHYGMLTHITFIAQLVWP
RSGNFIFPEWLLSSCQFLLVQEYVRLLNTWCEWNSASRKFILAVALLEMGEAHKACDHFL
RASRGILTDEFLADALLESSVLSENSSLIQYYLKVIKLFEEHNASDCIIELAETAILMAD
KDDPNLPTLHSIVFMQHLNLGHHIKAYNCLNSNPDVARRVDCLRQLVVTLFERKKLIDLI
SFPYVDMYEDLERIVEGRARSVDLIENNYYNFLYSFHIDKGNMRKAASVMYEQAMRLSQE
SQSVAIVSRQAQCLLACINALHLVSEKYRWIVRPVIDQNYLEEMDYEVQTRRSISSEDIL
HYKIKKQVEVLELNDIKREYYIVDARLKVSKINSELHIVSHAGPSELIIILPTIGLYTTA
LHLCDEFNVNKSSVLESLASQCIRLSRGEDPNAWDWLIQNDIFDIGLSNTNITNTAWRLL
EYLTLKHEKDRYSELHKAVTRKLLQEGAFIPQWLLMSYKKRNAAELLRLMLNAGRILEAS
ELGVEYINAVMGDGKENFGLKTHLTSVTTPVWLPLNILEVLLYELKEVKENPTFSESYQR
LQGALQSYEQKVIRVSKDMIEIKLSSKNC
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatttcctttgggatatcgagaagttgtgcctgatcaaactgtaccagagaaa
tggaacgaaatcacgttgaacacgggcggaagccaaagtaccttacaggacataaaagtt
ccagagagagcaggaggctattcatacaatgatggctcgaaatattttacacggaatcgg
tttatttattggcgtatttgtcatgatgtacttgagttggttgaacatagtctagatatt
aatttagccaactgtagagtaagatataagtttacagatacacccattttggatggcatt
tccatacatgaaacaattaattcagtcattatattaatagcaaccgtttctagtgttcat
aagttatcatttcctcatcctgaaagaattcataaaaatgaacactcattaagtacatat
aaagatttaggtacacagtcaatatttagtgaaatgtctgcgcagaatgtgaaaagaact
aaggaagatccacatatgtttcatgttatcacaaatgcaggaactacaaattctccagtt
cctcatgcagctgcatcatggcttattccaccacaagaagcactgtttgctcttgcttat
aattctggaactatacttctcctgaggctagatacaaaaactggccttgtacatagcagt
gaattaaaacaagattcaatagtgccaagatttcttagtggtattgcaactgctttcaga
ggacgcaattctgaagcccatgtggctatgtcattaacaatacatagttgtgaaagtgat
acatatctgtttgcattgtgtcgtgaaggtaatatccgtatgtggtcttgtaacaaagct
caatgtgtggccgtgactgatacggcgatagataatcgcattgcttcgcaaggtgcacaa
ggtcatatattaagaaaagcattgggtcctaataatgaattatacttgggaactttttta
aaatttagtactagatgtgaatttagtattttaaagccaattcaagataatgggatgttt
aaatttgttagattatgtaccaagttcgcgcaagatcaacatttagttgactttttcttt
accactactcgattatgggctgtttggagaaccactgatatggatacagttgaagtaacg
catgctcaattatcattgagtggtggacgcgttaattctgaatgggaagctgcgattcta
gaacaaacgccagacagagactacattcttagtgatgctgatactgatccaagacaagca
tatatcaattacatttttcaccctggtcagttctctttggcagatataacaaaagcattg
aacatatacaaaagatctaattttttggaagataaaattctttctgctgcggaattgaaa
gaacgcgtgtgtattgcggtagaagctgagatacaagctgaaattatggattacgaactt
atggatgaagattatttagaaattgccaatcgttgttggtcaaaattttattcttgggtt
atacagtatcatgccaatagtacaaggccagtgggattgttgttactgcctagcgtttac
ggagtagttttacttaaaaagtcgtgcttctcgcttttgagaccaatggaagctttagaa
tatttaatgttttgtaatgaaagatcatatacatcccgattcaaaacaacgccggttttg
tcacaagacgaagatatatgtcaggatcttattactttaatgtcagcattagtactatta
gaagaacaattacctgaagaaactaaaacagcggtaaagagagagctgtatcatttaaaa
agtccagacactattatcgatgatttattgtcaaaactgatgttagagtcggaagaaccg
attagtaactttgtcacacatcatcttagctgtcacaaattatcaaatgttagagatata
tccagcgctatggcaatgttgctagaaacattaacatatgatcttggacaaccaaacaaa
gtacatcttaatgatgatcatgatgcttcgatactattactcaatataaatcactttttt
agtagtcacttaggcatctcggcaatatcaaaaagtgtagcacaaataacacaattgaga
tttgcaatctgcagaaatttattaattttacaacaaatgatactactacgacctgaattg
tttgattcacgatcattacattccataaaatcatcattagcacctaagacagttgtgtta
atgcaagcttattatgttgtgacgtggatatgtgaatccacagcattaccaatgcctgta
caatctctattagattctagtgttcagcgtctagcattattgaaacttgttgattcgaga
gcaaatataggattcaagcaacatcgatcttcatcgttattagaattatttatagagaac
agtggtgcaaaacatgctcacaatttgatggctcatacaaatttagatgcgaccagttta
attccatggcattatgggatgttaacgcatattactttcatcgcacagctcgtatggccg
agatcaggaaattttatcttccccgaatggctattgtctagttgtcagttcttgttggtt
caagagtatgtgaggcttctgaatacatggtgcgagtggaacagtgcatcgaggaaattt
atattagcagtcgcgttacttgaaatgggagaagcgcataaagcttgcgatcatttcctt
cgagcttctagaggaattttgacagatgaatttctagctgatgccttactcgaatctagc
gtactatccgaaaatagttcgttaattcagtattacttaaaagttatcaaattatttgag
gaacataatgcttccgactgtatcatagagctcgctgaaacagctatattaatggctgat
aaagatgatcctaatttgccaacacttcactcaatagtattcatgcaacatttgaacctg
ggtcaccatataaaagcttacaattgcttaaattcgaatccggacgttgcacgtagagta
gattgtttgagacaattggtagtgactctctttgaacgtaaaaaattaatagatttaatt
tcatttccttatgtcgatatgtatgaagatttagagagaatagtagaaggtagagccagg
agtgtggacctcatagaaaataattactacaattttttatatagctttcacatagataaa
gggaacatgcggaaagctgcatcagtgatgtacgagcaagctatgcgattaagtcaagaa
tcacaatctgttgcgatcgtatcaaggcaagctcagtgcttgttagcttgtattaatgca
ttacatcttgtctctgaaaagtatagatggatcgttaggcctgtaattgatcagaactat
ttggaggaaatggattatgaagtacaaacgagaagaagcatcagtagcgaagatattttg
cattataaaataaaaaaacaagtcgaagttcttgaattaaatgatataaaaagggaatac
tacattgtggatgcaagattgaaagtatcgaaaataaattcggagttgcatattgtttca
catgctggcccctcggagctaattattatactaccaactattggattatacacgacagcg
ttgcatttatgcgatgaatttaatgttaataaaagttccgtgcttgaaagtctcgcttca
cagtgtatacgtttaagtcgaggagaagatccaaacgcatgggactggcttattcaaaac
gatatatttgacattggtttatcaaatacaaatattacaaacaccgcttggagattgtta
gaatatttaacgttgaagcatgaaaaagatagatacagtgagttgcataaagcagtcact
cggaaattacttcaagaaggagcgtttatacctcaatggttattgatgtcatacaagaaa
cgaaatgctgccgaacttcttcgtcttatgttaaatgctggtagaatattagaagctagc
gagttaggagttgaatacattaatgctgttatgggtgatggtaaagaaaatttcggtctt
aaaacgcacttgacatccgtaactacaccagtttggttgccacttaacattttagaagtg
ctattatatgaattaaaagaagtcaaagaaaatcctaccttttccgagagctatcaaaga
ttacaaggagcattacaaagctatgaacagaaagtgataagggtgtcaaaggatatgatt
gaaataaaattaagtagcaagaattgctag
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