Bombus vancouverensis nearcticus: 117154465
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Entry
117154465 CDS
T07628
Name
(RefSeq) GRB10-interacting GYF protein 2-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117154465
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117154465
Surveillance factors
Other surveillance factors
117154465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
TRI4_N
GYF_2
Motif
Other DBs
NCBI-GeneID:
117154465
NCBI-ProteinID:
XP_033185371
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MTDSMKFGPEWLRNLSGDTCNSSGGGGGTTSLTTPRYQLAEHRYGREEMLILFDRNCKPP
EPLTNFSSLYVEKTQLPLALIQMTEDETRMWNGGITNGGRGRGGSVDRGGRGRSGRGSLY
SSHYSRGVGFDDSGDGSRIDSQPFQGRNRPFDRSQSERGWSERNGASDPGEWNGSTSPRK
ELSRGASGSSLMESNWRRHRGGTEDDDGWRKWGRSSWRESGSMDRDRLERNEGDGEEGRS
SGSRWEHRGSHRVTHDSSHHPPPRTTRSWDSNHHDNNHDNLPEWATENPSESGGSFDASG
AFHGGMYSDDDEDGVISAGGTQESRTRRVSEGSATNIKKPSSKPLSYSSTQGQTAGRNSN
SGISSVSKERPKSLHPLDDKNECIEKERRSSSPTKLPITVLTDNTVTKTLTSTSSETSQK
RNTVATSTEHTKTEKMPSSDSGTNKSPTKEKKKEDIETETKLDPIPTTAKRQVPVQTESQ
RVVHSAEMDNVRHKSEDDLDRMKEEADALVAKLMADEENHREKTASIPPSIGNQSSTVSS
TNGQEKWFYRDPQGEVQGPFLASEMAEWCKAGYFTAGLMVRRTCDERYSTLGDLMKMCGR
IPFIPGPPIPPLKLTDQVIPSVPNTVPAGMTALSKSGIEDPILLLQYQHMRLIQNQQLLL
RQMRTSAIAKLSQSEHWATLSPIEQNQLIFQYVFHDSEIPEMPISTNPFVPHLPSQASNP
VMQLFTQMQQAKTQPETHLTSNPHSSTTAHPPTVDPIQQLIQQMGGMQNISGLQQSSINS
TSAATQEDNPIKSLLRQLNVNANGHPQTPHIDTVWPQPPPQINPQFNAQSWLAQVGPIPA
VPPGQLPTSLWDLHTKEIKTEQQILEEQNLRLQEDRKKEELRKQEELQRQADEENAKRKK
EEQAKQAEEAKRKDEERKKKEEEKKRKEEEKRKQEEERKKKEEKKRKEEEKKREEKRKQE
EENLRKKQEEEKKKKEELRKQEEKQKKEEEKRKKLEEEQKKQEEERMRKEAEARKQAEAE
EQARRAEQRRREADALRRLQERSKAPWAQAPRAPAPATPAASLAEIQRLEREKKAEEQRF
QQMMQQQLAQQKAIETAQEASVMDSSKRLQFKWAEKATASTKSVPVKSLAQIQQEEQERI
AKVKQQERERQEKAGQKESMNVLKNAGIWGAASQCLNWANSSSSNNNQVWSNNSGTSGFW
DDPTPIKPTAVKQSVKQTTTVKALTANQQQQQSNKTNKSKNKREEELVKKLFEQNTAKTD
DFTQWCNKALSGLQVSVDIPTFVGFLRDIESAYEVKEYVRDYLGDNKQSSEFAKQFLEKR
SKWRSAQRPQAQADDLCKPAPAVNPNAPTEFQEVKGKSKKPKKGKMYKVDNRILGFSVTA
APDRINVGDRDYGEGV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgacggattctatgaaatttggtccagaatggttgcgcaatttgtctggagatacttgc
aatagtagcggtggtggtggaggtactacaagtttaacaactccacgttatcaattagct
gaacatagatacgggcgagaagaaatgttgatcctgtttgaccgtaattgtaaacctcct
gaaccattgacaaatttctcatcattatatgttgagaaaactcaacttcctttggctctt
atacaaatgacagaagatgaaacgcggatgtggaacggaggaataactaatggcggtcga
ggaagaggtggaagtgtagatcgtggaggacgtggaagaagtggaagaggtagcttgtat
tcttctcattattcccgtggtgttggtttcgatgattcaggagatggatcacgaattgac
agtcaaccatttcaaggaagaaatcgcccatttgataggtcgcaaagtgaacgtggttgg
tcagaaagaaatggagcctcagatccaggtgaatggaatggttctactagtcctagaaaa
gaattaagtcgtggggctagtggtagttctcttatggaaagtaattggcggcgtcatcgt
ggtggtacagaagacgatgacggttggcggaaatggggtaggagtagttggcgcgaaagt
gggagtatggatagagatagattagaaagaaatgaaggagatggagaagaaggacgaagt
agtggtagtagatgggaacatcgtggtagtcatagagttacacatgattcaagtcatcat
ccgccccctcgtacaacgcgctcttgggattcaaatcatcatgataataatcatgacaat
cttcccgaatgggctactgaaaatcctagcgaaagtggaggaagtttcgatgcttcaggt
gcttttcacggtggaatgtattcagatgatgatgaagatggagtgattagtgcaggtggt
actcaagaatcaaggactcggcgtgtttccgaaggaagcgctactaatattaaaaaacct
agtagcaaacctttatcttatagttcaactcagggacaaacagcgggtcgcaattccaat
agtggaattagttcagttagtaaagaacgaccaaagtccttacatccgctcgatgataaa
aatgaatgcatcgagaaagaaaggagaagcagctctccaacgaaactgcccattacagtt
ttaacggataatactgttactaaaactttgacgtcaacatcatctgaaacttcacaaaaa
agaaatacagtagcaacaagtacggagcatacgaagactgaaaaaatgccatcgtccgat
tcaggaaccaataaatctccaactaaagaaaagaaaaaagaagatattgaaacggaaaca
aagttggatccgattcctactactgcgaaaagacaagttccggtgcaaacggaatctcaa
agggtcgtacatagcgcggaaatggataacgtaaggcataagtcggaagatgatttagac
agaatgaaggaagaagcggacgcattagttgcaaaattgatggcagatgaagaaaatcat
agagagaagactgctagtataccgccttctattggtaaccaatcttctacagtttcatcc
acaaatggacaggagaaatggttttaccgtgatccacagggtgaagttcaaggtccattc
ttagccagtgaaatggcagaatggtgtaaagctggttacttcacagcaggattaatggta
agaagaacttgtgacgaacggtatagcactttaggagacttaatgaagatgtgtggcaga
ataccgtttatacctggacctcccattcctcccttaaagttaacggatcaggtaatacca
tctgttcctaacacagtgccagctggtatgactgcattatcaaaatctggtatagaagat
ccaattcttctacttcagtatcaacacatgcgattgatacaaaatcaacaattactttta
agacaaatgcggacatcggctatagcaaaactttctcagtctgagcactgggcaacgtta
agtcctatagaacaaaaccaattgatttttcaatatgtttttcatgactcagagattcca
gagatgccaatctctacaaatccattcgtacctcatcttccgtcacaagcttcaaatcca
gttatgcaacttttcactcaaatgcaacaggctaaaacgcaaccagaaactcatttaacg
tcaaatccacattcaagtacaacagcgcatccacctacagtcgatcctatacaacaactt
atacagcagatgggtggtatgcaaaatatatcgggacttcaacaatcaagcataaattca
acgtcagctgcaacgcaagaggacaatcccataaaatctttgttacgtcaacttaatgtt
aatgcaaatggccatccacaaacacctcatatcgataccgtctggccacaacccccgcca
caaataaatccacaatttaatgcacagagttggttagcgcaagttggaccgataccagca
gtacctccaggccagttacctacatcattatgggatctgcatactaaagaaataaagact
gaacagcagatattggaagaacaaaatcttcgattacaagaagataggaaaaaagaagaa
cttcgaaagcaagaggaattacaacgacaagctgacgaagaaaatgcgaaaagaaaaaag
gaagaacaggccaagcaggcagaagaagcgaagcgaaaagatgaagagagaaagaaaaaa
gaagaagaaaaaaaacggaaagaagaagagaagcgtaaacaagaggaagaaagaaagaaa
aaagaagagaaaaagcgtaaggaggaagagaaaaaacgagaagagaagcgaaagcaggaa
gaagaaaatttaaggaaaaaacaagaggaagaaaagaaaaaaaaggaggaacttagaaag
caggaagaaaagcaaaagaaggaagaagaaaaaaggaaaaagctggaagaggaacaaaaa
aagcaagaagaggaaagaatgcgaaaagaggcagaggcacgtaagcaggctgaagctgaa
gaacaagctcggcgagcagaacagagacggcgggaagcggatgcactccgtagattacaa
gaacgaagtaaagcgccatgggcacaggcgcctcgtgcaccagctccagctactcctgct
gcttcacttgctgaaattcaaagactcgaacgagaaaagaaagcggaagaacaacgattt
caacaaatgatgcagcaacaattagcacaacagaaagccatagaaacagctcaagaagca
tcagtaatggactcttctaaaagattgcaatttaaatgggcagagaaggctacagcttct
acaaaatctgtaccagtaaagagtctcgcacagattcaacaggaagagcaagaaaggatc
gccaaggtaaagcagcaagaaagggaacgccaagagaaggcaggacagaaagaatcaatg
aacgtactgaaaaacgctggaatatggggtgctgcttctcagtgtttgaattgggccaat
tcaagtagctctaataataatcaagtttggtcgaataatagtggtaccagtggtttttgg
gacgatcctacgccaattaaacctacggccgtaaagcaatctgttaaacagactactaca
gtaaaagctcttactgccaatcaacaacagcaacaaagtaataaaacaaataagagtaag
aataaacgagaagaggaattggttaagaaattatttgaacaaaacactgccaagacagat
gatttcacacaatggtgcaacaaagccctaagtggtttacaggtgtctgtagacatcccc
acgtttgttggatttttgcgagacattgagtctgcatacgaagtaaaagaatatgttcga
gattatcttggcgataacaaacaaagttcagaattcgcaaagcaatttttagaaaaacgt
agtaaatggcgatcggcccaacgacctcaagcacaagcggatgacttgtgcaaaccagcg
cctgctgttaatcctaatgcacccacggaatttcaggaagtaaagggaaagtcaaagaag
ccaaagaagggaaaaatgtacaaagttgataatagaattcttggctttagcgtaaccgca
gcccctgatcgaatcaatgtaggtgatcgcgattatggagaaggtgtttga
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