Bombus vancouverensis nearcticus: 117154560
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Entry
117154560 CDS
T07628
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04137
Mitophagy - animal
bvan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117154560
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117154560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117154560
Enzymes [BR:
bvan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117154560
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117154560
Multi subunit type E3
ERAD complex
117154560
LMBR1L-GP78-UBAC2 complex
117154560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
CUE
zf-RING_11
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-RING_Vps41
LPD39
DYF4_N
FAR1_N
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117154560
NCBI-ProteinID:
XP_033185533
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MPIEFLDRLPMPNLRLYTAISFGVLSCSIYYAVQIIKDPAWKITHTYVDSENDSANNIDF
DPRDSSMYLKELLECMLDEPICIWTLINMAYCVLILLGKTIQKLVFAELRVSERQHLKDK
FWNFVFYKFIFVFGVLNVQYMDEVLLWWAWFTALGFLSLLSQLCKDRFEYLSFSPTTPGW
SHAKLLGLLATILALSSFMLLLCTAAAFFFVSFNTFVFTAAECILLGVRTIHVMVRYIIH
LYDTRGAGTSSQRSWDKRGPLTYYTDLTAELIVLAVDFLHHVHMLLWSNIFLSMASLVIC
MQLRYLFYEIQRKITKHRNYLAVLNHMEQNYPMASQEELAENSDNCAICWEKMETARKLP
CAHLFHNSCLQSWLEQDTSCPTCRLALNMQPSHLVNTQELSTELQTPARRNENHFFHFDG
SRYVSWLPSFSVEVSHNRLRGNISTITHNNSQMDTMIRQVQQLFPQFPRNLIVEDLRGTR
SIEWTVANILDGVLMSPHHIIEEPQLESVLQIHTSTTETSVSLNTPSMPLPSDPRFDIPL
ADSGEEPSSLGGRFSKSSSEREQILQRRKELLRLTAKEKYLEKCREKHGADESVSNATS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagaattcttggaccggcttccaatgccaaatctccggctgtatacggcaata
agcttcggcgtgttatcctgttcgatatactatgccgttcaaatcatcaaagacccggca
tggaagatcactcacacttacgtggactctgaaaatgactcggccaacaacatcgacttc
gatccgagggattcatcgatgtatttgaaggagttgctcgagtgcatgctcgacgagcct
atctgcatctggaccttaatcaacatggcgtactgcgtgctaattctgctgggtaaaaca
attcaaaagctcgtattcgccgagctgcgagtctccgaaaggcaacacctaaaggacaag
ttttggaacttcgtgttctacaaatttatcttcgtattcggcgtgctgaatgtgcagtac
atggacgaggtgctactgtggtgggcttggttcaccgcgcttggcttcctaagtctcctc
agtcaactatgcaaggatcgattcgaatacttatcgttttcgcctacaacaccaggttgg
agtcatgcgaaacttcttggacttctcgcgactattcttgcattatcctccttcatgtta
ctcctatgcacagctgcagcgttcttcttcgtttcattcaatacctttgtcttcactgca
gctgagtgcattttactaggtgtcagaacaattcatgtaatggtgcgatacataattcat
ctgtatgatactcgaggggctggaacctcttcgcaacgttcttgggacaaaagaggtcct
ctaacttactacacagatctaacagcagaattaatagtgctagctgtagattttcttcac
catgtccacatgctactttggagtaacatattcctaagcatggcatcccttgtaatctgt
atgcaacttaggtatcttttctatgaaatacaacgcaagatcacaaagcacaggaactat
cttgctgtattaaatcatatggaacaaaactatccaatggcaagtcaggaagagttagca
gagaactcagacaactgcgccatttgctgggagaaaatggaaacagctagaaagctacct
tgtgctcatcttttccacaattcctgtttacagtcttggttggaacaggatacttcctgc
ccaacttgtagacttgccttaaacatgcaacctagccaccttgtaaacacacaagaatta
tcaactgaactacaaacgccagctagacgaaatgagaatcatttctttcatttcgatggc
tcaagatatgtgtcctggttaccaagcttctccgttgaagtttcccacaatagactacgt
ggaaatatttctactattacacataacaactcgcaaatggatactatgattagacaggtg
cagcaactgtttccacaattcccccgcaatctaatcgtagaagacctcagagggacgaga
tcaatcgaatggaccgttgcaaatattctggatggagtcttgatgtctcctcatcatata
atcgaagaaccgcaattggaatccgtccttcaaatccataccagtaccacagaaactagt
gtttctttgaataccccttcgatgccgctaccttcagatccaagatttgatattcctctt
gctgatagcggtgaagaaccttccagcctaggaggacggttttccaaatcatcgtccgaa
cgagaacaaatcctgcagcgtcgcaaagaactgctgagactcactgctaaggagaaatat
ctcgagaagtgccgagaaaagcatggagctgacgaaagtgtttctaatgccacctcttaa
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