Bombus vancouverensis nearcticus: 117155000
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Entry
117155000 CDS
T07628
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03440
Homologous recombination
bvan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117155000
03460 Fanconi anemia pathway
117155000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvan03032
]
117155000
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117155000
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117155000
DNA replication proteins [BR:
bvan03032
]
Eukaryotic type
DNA Topoisomerases
117155000
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117155000
FA (Fanconi anemia) pathway
117155000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
KH_SLS1_1
CUT_N
Zn_Ribbon_TF
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
117155000
NCBI-ProteinID:
XP_033186415
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MLFVTKVFNTAQLSLYESKQYYQFFIRFKSSFTVMKVLNVAEKNDAAKSIAGYLSRGSSK
RREGLSTYNKIYEFNSYLWNQNCEMIMTSVSGHLLNYEFVGAYRKWQGCHPLSLFDAPVI
KQCSEENSIKIKKTLEREVQRCGALIIWTDCDREGENIGFEIIQVCRAIKPNIRIYRAKF
SEITQASVNRALQNLCEPDKAISDAVDVRSELDLRIGAAFTRFQTLRLKQVFPRTLADML
ISYGSCQFPTLGFVVERFLAIKRFKSEPYWKIKVMDIRDNISVEFRWARGTLFEKLPCEV
ILDICLEQPMATVKKVLSKPKNKWRPLPLDTIELEKQGSRKLHLSAKDTMRIAEKLYTQG
LISYPRTETNIFPKELNLVPLVNQQVNNSAWGNFAQQLLEKGLTPRQGKKSDQAHPPIHP
IKYADGLNGNEAKVYEFVVRHFLACLSCDAVGQETTVEIDIAGEKFAANGLQIIEKNYLN
VYIYEKWNDKEIHIYQEGQVFQPTSIDMVEEKTSPPQLLTEADLISLMDKYGIGTDATHA
EHIDTIKSRHYVGLINEKYLIPGKLGIGLVMGYDNMGFEMSKPNLRAELEKDLKLICDGQ
KSPNDVLEIQLKKYRDLFKLTVERANLIDIALADYLDERPSNTQVEISHPPQKIIFKCPK
CNSDMILKDRKQGTGKYIGCMSFPTCNNVIWLPQIIEHVEVLDEVCSECIGNIRKLKFKL
LRNVFPIYGTDYTTCIGGCDPMFNEALNIKNECIKSQESGYHSTFNRTIVSNSSSIGNTV
THPSSNAENRSLSESNASIGSMRNENDDRYTSRSRNVKRQNVSKNNTWIDANNVNSSNND
QRLIRNEQKTWGNIDDDAIIMCNCHENAIRLTVKKEGPNHGRIFYKCAKRQNSCNFFLWA
SEDNTQQMQNNTNSSSNQMFVASTSTRSSVHVNSYQDDLTLSHNDIKCHCNQNAIQRIVQ
KDGPNKGRPFYSCPKSINECCKFFQWADENGGNTYNGSGGQNKGTFREEKNLSKRRHIAT
GKRKCGICGTEGHTRRTCSENAMD
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttacaaaggtatttaatactgcacagttaagtttatatgaatcaaaacaa
tattatcagttttttataagatttaaaagttcttttacggttatgaaagttctcaacgtt
gcggaaaagaacgatgccgcaaaaagtatcgcgggctatttgtctcgtggctcttctaaa
cggagagaaggattatcgacatataataaaatttatgaatttaactcatatttatggaat
caaaattgcgaaatgatcatgacttctgtatctggtcatttattaaattatgagtttgtt
ggggcatatcgtaaatggcaaggttgtcatccattaagtttatttgatgcacctgtaata
aagcaatgttcggaagagaattctattaagattaaaaaaactttggaaagggaagtacag
agatgtggtgcattaattatttggactgattgtgatcgtgaaggagagaatataggtttt
gaaattattcaagtctgtcgtgcaattaagcctaatattcgtatatatagagcaaaattt
tctgagattacacaagcatctgtaaatagagctcttcaaaatttatgtgagccagataaa
gcaattagtgatgctgttgatgtacgaagtgaattggatctaagaataggtgctgcattt
acaagatttcaaacactgagactgaaacaagtatttcccaggactctggctgatatgctg
attagttatggtagctgtcagtttcctacattaggatttgtagttgaaagatttttagcc
ataaaacgatttaagtcagaaccatactggaagataaaagtaatggatatccgtgataat
atttctgtggaatttagatgggcaagaggaacactatttgaaaaattgccttgtgaagta
attttggatatatgtttggaacagcctatggctactgttaaaaaagtattaagtaaacct
aagaataagtggagaccactaccactggacacaattgagctggaaaagcaaggctctcgt
aaacttcatttaagcgcgaaggacactatgagaattgcggaaaaattatatactcaaggt
ttgattagttacccacgtacagaaacaaatatatttccaaaagaattaaatttagttcca
ttggtgaatcaacaagtaaacaattcagcatggggcaattttgcacagcaattattagaa
aagggattgactcctagacaaggcaagaaaagcgatcaagcacatcctccaatacatcca
ataaaatatgctgatggtttaaatggcaatgaagccaaagtttatgaatttgtggttcga
cactttttggcttgtttatcgtgtgatgcggtaggccaagaaacaacggtagagatcgat
atagctggtgaaaaatttgctgctaatggtctacaaattattgaaaagaattatttaaat
gtgtacatatatgaaaaatggaatgacaaagaaattcatatatatcaagaaggacaagtt
ttccaaccaaccagcatagatatggtagaggaaaaaacaagtcccccacaattgttgact
gaagctgatttgatcagtttaatggataagtacggtattggtaccgatgctactcatgca
gagcatatagatacaataaaatcgcgtcattacgtgggtttgataaatgaaaagtatctg
atacctggaaaacttgggattggattggtaatgggttatgataacatgggatttgaaatg
tcaaaaccaaacttaagagctgaactcgaaaaggatcttaaattgatatgtgatggacaa
aaaagtccgaatgatgttttggaaattcaactaaagaaatatcgtgatctatttaaacta
acggtagaacgtgctaatttaatcgatattgctttagccgattacctcgatgaacgaccg
agtaatacacaggtagaaattagtcatccacctcaaaaaattatctttaagtgtccgaaa
tgcaactcggatatgatccttaaagatagaaagcaaggcacgggaaagtacattggttgc
atgtcgtttccaacatgtaataatgtaatctggttacctcagattattgaacatgtcgaa
gttttggatgaagtttgttcagaatgtataggaaatattcgtaaattaaaatttaaacta
ttgagaaacgttttccccatttatggtactgattatacaacttgcataggtggttgtgat
cctatgtttaacgaagcattaaatataaagaacgaatgtattaaaagtcaagagtctggt
taccacagtacatttaacaggactattgtctcaaattcatcttcaatagggaacactgta
actcatccatcttcaaacgctgaaaacaggagtttatctgaaagcaacgcatctataggg
tccatgcgaaatgagaacgatgatcgttatacaagcagatcaagaaatgttaaaagacaa
aatgtttcaaagaataatacatggatcgatgctaataatgtcaattcttcaaataatgat
caaaggttaattagaaatgaacaaaaaacatggggtaacatcgatgacgatgctattatt
atgtgtaattgccatgaaaacgcgattcgattaacagtaaagaaagaaggaccaaatcat
ggaaggatattttacaaatgtgcgaagcgtcaaaatagttgtaacttttttctttgggca
tcagaagacaatactcagcaaatgcaaaataatacaaatagtagttcaaaccagatgttc
gttgccagtacaagcactagatcaagtgttcatgttaatagttatcaagatgatcttacg
ttatcacacaatgacattaaatgccattgtaatcaaaacgcaatacagcggattgtacag
aaagatggtccaaataagggacgtcctttttactcatgccctaagagtataaacgaatgt
tgcaaattctttcaatgggcggatgaaaacggtggaaatacatataatgggtctggagga
caaaataaaggaacatttagagaagagaaaaatttatcaaaaagacgtcacattgctact
ggtaaaagaaagtgtggaatctgcggtacagaagggcatacaagaaggacttgttccgag
aatgcaatggattaa
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