Bombus vancouverensis nearcticus: 117155030
Help
Entry
117155030 CDS
T07628
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04140
Autophagy - animal
bvan04142
Lysosome biogenesis
bvan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117155030
04140 Autophagy - animal
117155030
04148 Efferocytosis
117155030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117155030
Membrane trafficking [BR:
bvan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117155030
Hops complex
117155030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3H2C3
WDR55
zf-RING_5
zf-RING-like
zf-C3HC4
zf_RING_Vps8_fungal
TPR_11
Motif
Other DBs
NCBI-GeneID:
117155030
NCBI-ProteinID:
XP_033186460
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MMAFLEWRRFNFFDLKKEVDGGKIATALGDAQVTAATSGNGTLVFGDYTGNVHLVNRTYD
VTTFRAYDVTLTLAQQVQHSTFLFTIGEDESGCNPTIKVWNLAKPDKQGNPTCLRISRAI
PSYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVFEHTNFSVTGLAIK
SSGKQTHLFVATPNSVFVYNITVKDQEFKSPLDTMGCARKCSVLAESMQDSHFMIGRDDA
IYCYTPDGRGPCYAAGGQKIMLEWFRSYLVIIAKEAANDPRTTTTISAKPSTIEPIPPGV
DKHVITVLDIQNKCIVFSAPMLSVQAVLSEWGGFFILSGDSKLYHLDEKDLQSKLALLFK
KNLYDISIRIAKNQQYDAEGLVDIFRQYGDHLYSKGDHTGAIEQYIKTIGKLEPSYVIRK
FLDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREIDFDVE
IAIKVCRQASPEDALLLAKKHDRYEWYLRIQIEDKHEYKKALEYMATLDFEEAESNMKKY
GTILIENVPDESTQFLKALCTNYRPSNQPLVDQEMLDGTVDQHIDKANPEDFIHLFLNNS
ERLVEFLEHLVKMNTKWSTLVYNTLVEHYLHIWSALDNDVAKVQYEQKIVRLLQNSEACY
DKDQILILCHQHNFRRGLLFLYEESKLYQEILRFHLREGDSEQILATCKRFGHQDPNLWV
QALWSVARNKEAPTKLLADILTHIGQERLLSPLMVLDALSTSLSCTLGDVRTYFNSVLRT
EHKQTQADIELSEKYRADTKKIREQIDSIKNSTIIFQGSRCSACHHQLELPSVHFMCQHS
YHQHCFQRFSENENECPACLPDNKKLLDIIKAQEQSKDLHETFHSLLDRAEDPFSLVADY
FGRGVFKKLMVITDSDKMLSASVAKFDESKLNYGPGAEARIRLSEGKNTTLGKTETHRSY
DNYNTVADDRLRSYPKSDLYSSSIEANISGTINDISSPRGNSKKAVPVPIKEARILNSTT
PKSSPVQKSYVPPKTPIVPSNPFGADDYDESKNPFAEDKDDDTTNPFKDNDDTNPFKNND
DDDYNKNLNPFGR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatttctcgagtggagacgcttcaatttttttgatcttaaaaaagaagttgac
ggcgggaaaatagccacggctcttggtgacgcccaagtgacagcagctacgagcggtaac
gggactctagtattcggagattacacaggcaatgtgcatttagtgaatagaacttacgat
gttaccacatttcgcgcttatgatgtcacattaacgctagctcaacaagtccaacattcc
actttcttgttcaccattggtgaagatgaatcaggttgtaatcctaccataaaggtctgg
aatttagctaaaccagataaacaaggcaatccaacatgtcttcgtataagtagagccata
ccaagttatagagcagttcctgcaactgctctatgtgtgcatactagtcttacattaatg
gctattggctttggagatggctctattatgttgtataggggtgatttaactagggaaagg
aaaaacaagataaaagtattcgaacataccaatttttcagttactggtttagcaataaaa
tctagtggcaaacaaactcatttatttgttgctacaccaaatagcgttttcgtatataat
attactgttaaggatcaagaatttaaatctcccttggacactatgggctgtgccagaaag
tgtagtgttcttgcagaatctatgcaagatagtcatttcatgattggtcgtgatgatgca
atttattgttacacaccagatggtagaggtccttgttatgcagctggcggtcaaaaaatc
atgttagagtggtttagaagttacctagttattatagcaaaagaagctgcgaatgatcca
agaacaacaactaccatttctgcaaaaccgagtactatagaaccaatacctccaggagtg
gataagcatgtaattacagtacttgatatacaaaacaaatgcattgttttttctgcccca
atgttgtctgtgcaagctgttctatcggaatggggtggattttttatactcagtggagat
agtaaactttatcacttagatgaaaaagacttgcaatcgaaattagcattacttttcaag
aagaatttatacgatatatctataagaatagctaagaatcaacaatatgatgctgaaggt
ttagtcgatatattccgacaatacggcgatcatttatattcaaagggagatcataccgga
gcgatagaacaatatattaaaactattggaaagttagaaccgtcgtatgtaattagaaaa
tttttagattctcaacacatagacaatctaacaacctatttgcaagctttgcataaaaat
gggcaggcaacagaagatcatacaactttgctactgaattgttatacgaaactcaatcat
acagataaattaaaagaatttatcatgacaaaagatagagagattgatttcgatgtcgaa
attgcaataaaagtttgtcgtcaagcatcgccggaggatgctttgctgcttgcaaaaaaa
catgatcgttacgaatggtatcttcgtattcaaatagaagataaacacgagtacaaaaag
gcattagaatatatggctactttggactttgaagaagcagaatccaacatgaagaaatat
ggtactatcctaatagaaaatgtgccagatgaatcaacgcaatttttaaaagccttatgt
accaattataggccttccaatcaaccacttgtagatcaggaaatgttagacggtactgtg
gaccaacacatcgataaagctaatccagaagattttattcacttgtttttaaataattca
gaacgtctcgtagaattcttagagcacctagtaaaaatgaataccaagtggagtactttg
gtatacaacactttagtagaacattatcttcatatttggtcagctttggataatgatgtg
gcaaaagtacaatatgaacagaaaattgtacgacttttacaaaattcggaagcgtgttac
gataaggatcaaatattaatcttatgccatcagcataatttcaggcgtggtttactcttt
ctttatgaagaaagtaaattataccaagaaatattacgattccatttacgcgaaggggac
agtgaacaaattttagctacgtgcaaacgatttggacatcaagatccgaatttatgggtc
caagctttatggagtgttgcaagaaataaagaagcaccaactaaacttcttgcagacata
ctaacccacataggtcaagaaaggcttttatcaccattgatggttcttgatgcactttct
acttcactttcttgtaccttgggcgatgtgagaacctattttaacagtgtgttacgaaca
gagcataaacaaacacaagcagatatagaattatctgaaaagtatcgagcagatactaaa
aagatacgagaacaaatagattcaattaaaaatagtactattatcttccaaggatcacgt
tgcagtgcgtgtcaccatcagttagaacttccatcagtacattttatgtgtcagcattca
tatcatcaacactgctttcaaagattctcagagaacgaaaatgaatgtccagcttgttta
ccagacaataaaaaattgttggatatcataaaagcacaggaacaatcaaaagatcttcat
gaaacatttcacagtttattggatcgagcagaggatccattctcattagttgctgattac
tttggtcgcggagtttttaaaaaattaatggtgatcacagatagcgataagatgttgtct
gcgtcggtggcaaagtttgatgaatcaaaattgaattatggaccaggagcggaagccagg
atcagattatcggagggaaagaacacaacgttaggaaaaactgaaactcatcgttcgtat
gataattataatacagtagcggatgatcgactgcgatcttatccaaaatcagatctgtac
tcttcatcaatagaagcgaatatctctggtacaatcaatgacatatctagtccacgagga
aattcgaagaaagctgtgccagtacctataaaggaagctcgtattctaaacagcacgaca
ccaaaatcatcaccagttcaaaaatcgtacgtgccaccaaaaacaccgattgtaccatcg
aatccattcggagcagatgactacgatgaatcgaaaaatccatttgccgaagacaaagac
gatgacactactaatccttttaaagataacgacgacacaaatccctttaagaataatgac
gatgatgactataataagaacctgaatccttttggtagataa
DBGET
integrated database retrieval system
