Bombus vancouverensis nearcticus: 117155114
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Entry
117155114 CDS
T07628
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04140
Autophagy - animal
bvan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117155114
04148 Efferocytosis
117155114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117155114
Membrane trafficking [BR:
bvan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117155114
Hops complex
117155114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3H2C3
zf_RING_Vps8
zf-RING_16
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_Vps41
zf_RING_Vps8_fungal
COMP
zf-rbx1
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
117155114
NCBI-ProteinID:
XP_033186591
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYTPPIRPDISTAGFIQMKFLDDGPIFIKQKVNFLPPDKILHL
VVNNNIIVIAMANNLLLRIDMKHPDSPEEIDISKYAMNMEMSRMFLDPLGNHLLISLVPK
SQDPPNPPPELFYLHRKTTKLKQAGKFKGHEITAIGWNFSNSSETTTGPILLGTSKGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKDSKPPITGLEFHKIPN
TDKYVIIVTTLMRIYQYIGAVQNPEEKPLLQQIFNKYLNVQESFNEVINNLPYSKIQFYY
PSLGILPKSFGWLTEPGIFYAQIDPKIDPKSVLTNQQMLICPEASLMGINTSQTSTPPLS
FVLTEFHALLLYTDRVKGMSLLNQDLIFEDIYNDAVGGLLNITKDYATRSIWAYSERAVF
KYKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYA
DTHSSFEVISLKFLQEWQIDALKTFLKKKLEGLKTQDKTQITMIVVWVIELFMNQMGVLR
SNNTSYLHDPQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLDALEVLKSQNNKELFYQFAGILLQELPRPAMTALISQGSLLKPS
KLLPALVSCNSDEKHAKEVIRYLEFCVYKQSCQEQAIHNFLLSLYARYKRDEVMRYISSQ
GQDINMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTINVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDIVRIEDILPFFSDFVTIDHFKDAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFINTKDTCNTCGVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNRPEDTRSVRSVSLSTKDQ
IKADIDDLIASECLYCGELMIESIDKPFIEEEDYERVMKEWI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcatctcaaagatcaaaacaagtatataca
ccaccaattcgtccagatataagtactgctggatttatccaaatgaaatttctagatgat
ggcccaatttttattaaacaaaaagttaactttttaccaccggacaaaattttacatctt
gttgttaacaataatatcattgttattgccatggctaataatctcctcttacgtattgac
atgaaacatccagattcacctgaagagattgatatatctaaatatgcaatgaatatggaa
atgtcaagaatgttccttgatcctttaggtaatcacttgttgatatctctagttccaaaa
tctcaagatcctcctaaccctccccctgaattattttatttacacagaaaaacaacaaaa
ttaaaacaggcaggtaaattcaaaggacatgagattactgccattggatggaacttttca
aattcttccgaaactactacaggtccaattctcttaggaacttcaaaaggcctcattttt
gaaacagaaattggtttagatggtgataaaatatttaatacaagcctggaacaatattgg
cgtcagcttcctaactatttacctctttatggtgctaaagaggtagaaggattggtattt
gatatagggaaagatagtaaaccaccaattactggtttggagtttcataaaataccaaat
actgacaaatatgtgattattgttactactcttatgcgaatttatcaatatattggagca
gtacaaaatccagaagaaaaacctttattacaacaaatttttaacaaatatttgaatgta
caagagagcttcaatgaagtaataaataatttgccttattctaaaattcaattttattat
ccttcacttggtatattaccaaaatcgtttggttggttaaccgaacctggtatattttat
gctcagattgatccaaaaatagatccaaaaagtgtgttaacaaatcaacaaatgttaatt
tgtcctgaggcaagtctaatggggatcaatacctcacaaacaagtactccaccattatct
tttgttttaacagaatttcatgccttattactttatacagaccgtgtaaaaggcatgtcg
cttttgaatcaggatttgatattcgaagacatttataatgatgcagtgggaggattactt
aatattactaaagattatgcaacacgttccatatgggcttatagtgaaagagcagtattt
aaatataaagttaataaagaagatagaaatgtttggcagatctacgttgataaaggtgaa
tttgaacttgcgaaacaatattgtaaagataatccagcacatatagatcaagtgcttgta
aagcaagcagaaatgctttttaagaataaggaatatgaaaaaagtgctctcatctatgca
gatactcattcgtcatttgaagtaatttccttaaaatttctacaggaatggcaaatagac
gctttaaagacatttcttaaaaagaaacttgaaggattaaaaacacaagataaaacgcaa
ataaccatgattgttgtatgggtaattgaactatttatgaatcaaatgggtgtattacgg
agtaacaatacatcatatttacatgatccacaatatctagaattacaaaaacaatttgat
agctttcttgcaataccaaaagttgaggaatgtataaaaagaaatcgtagcactatatat
gatttaatggcaagtcatggtgataaagacaatcttattcgtttaactataatgcattgc
aactatgaagaagtgatacgtcagcatttatataaaaataattatttagatgctcttgaa
gttctgaaaagccaaaataataaagagctattttatcagtttgctggtattcttttacaa
gaattaccacgtcctgcaatgactgctctaatatcacagggatctttattaaagccatct
aagcttctaccagctttagtatcttgtaatagtgacgaaaaacatgcaaaagaagtaatc
agatacttagaattttgcgtttataaacaaagttgtcaagaacaggcaattcacaatttt
ctattatctttatatgctcgttataaacgagacgaagtaatgcgttatattagctcgcaa
ggtcaagatataaatatggtacattatgatgtgcattatgcattacgattgtgccaagag
gttggcttaacagaagcttgtgtacagttgtctgctttgcttgggttgtggacaacagca
gttgatttagctttaacaattaatgttgatcttgctaaacaaatagctgctatgccctcc
gatcatgatgatgaattaaggaaaaagttatggttgaaaattgctgaacacgtagttcga
gaaaaagatgacatacagcaagcaatggaatttttgcagcattgcgatatagtcagaata
gaagatatattacctttcttttcagattttgttactatagatcactttaaggatgcgatt
tgcaattcattgcaggaatataaccaacatattcaagatttaaaagaagaaatgcaagaa
gcaacaaaagcagcagaacttattaggaaagatatacaagagttcagaacgaggtgcaca
tttataaatacaaaagatacatgtaatacttgtggtgttcaattactactacgacctttt
tatgtatttccatgtggacacagatttcatagtgattgccttgtagctgcattaacacct
atgttgtcaatggatcagagaacgaagctagctgatcttcaaagacaactcactgctctt
tcaaatagacctgaagatactagatcagtcagatctgtatctttatctacaaaagatcaa
atcaaggctgacattgatgacttaatagcatctgaatgtttatattgtggtgaactaatg
atagagtctatagataaaccatttattgaagaagaggactatgagagagtgatgaaagaa
tggatatga
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