Bombus vancouverensis nearcticus: 117155260 Help Entry 117155260         CDS       T07628                                  Name (RefSeq) nucleoporin NUP188 homolog   KO K14311   nuclear pore complex protein Nup188 Organism bvan  Bombus vancouverensis nearcticus Pathway bvan03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:bvan00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     117155260  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bvan03019]     117155260 Messenger RNA biogenesis [BR:bvan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      117155260 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UBN_AB Motif Other DBs NCBI-GeneID:  117155260 NCBI-ProteinID:  XP_033186949 LinkDB All DBs Position Unknown AA seq 1906 aa AA seqDB search MNVLKMEVPTVGSLPYCKELWFLISDTVCRCEKQLVEDEIKKETKLLKEGLLFFKPYTEA SLQNIPKNDPSPRMYELISKLAPLLNLDAIITWDLVCNFIKYEYRNCAETFASQLIDFTS MKALIDDIWEFYYSERMTVIKCLKLMVEYKDKGHRYQKEFAKFFDDVLFGALLESIRKQI EALKTVNPPIRSQLCTEEYLHRLYNSSLIEMRELLHILTVIIHDIHIAETEFMKFYESIG GEPRRLASTKSHEDKKAIARKIKEIQYSQAALFLVTLDVRKHPNMEEWIQSVRKSMQETF EQKCIRDNSPQDSPLFLSWMLANYAIDPENIDTMNRFRPFGIKAIQLNVFHYLQDLMNSE MICEKTHYAEIVRSSVYNLLTLVCAFVDEDKLNALNDIFNAVAATIQFSETAARFWEERN DGLWLIYKFAAEQFPYEFEPLTNIAIGLASASELSAERIAMELDNLQSLTLEIPRQRDHN KPLRPYEQECTIHKNSYTILEGCPRENIRILSSEREVVIFRQKASYWDALHHKIEQLFSQ AGGRITGTNEMNKNLPEHVSQGLKLLKTLAKRTWIRQSMVIPAELSFEIINRFSYPVLPE EKMYIYKIVAACIGISSELVLEYPEEILSRMRAGVYPRFNNRYQKTLDFAEAVSFDGGII ASWLSAIETIAHSYPILNAYLDILSKYLIRKYNEEALYTIEIPGMVFLLQGVLPKLDSWY FDLDAERTDLWLKSMFCLHRALESSLPKEDIRNELQLVVAYSLLYLEPRHALLKLIRTGE RTLHNKMMAETDWIRGKGFKAMKSVQLALSVVNRLLIFRKSLGLEIRDRSPLEAALYSSP RVPNGLLIVPTIVNYLYVWFSPPLQAMAVRLLKKFAEGSSMSLLVCMGMDGTAIRETFAS RRGLMSPTCVADVKVAILELVAVCLEKQPGLTEALFNIVHPAECKRIFPRSVEEFFTEGC RQFLVKYLNRIYEKDNIVCDKLYNSTMTLLRAMWYHRNEILVNFFRKRENFWTQLFAPLF REIVPGVKGYSHLLDIITLELFKSTTLEDDFNTNLKKLLDKSTDYWKKLTIYILDDVHAD SEESNRNEKRDSNVTDSLYETNLESWYNFIVTLTDERIAKNYPINVSQAQLITQRSLESL LERIKQSYNVSSQKITMLLASLTLRCITSWKQMCVDDSRIFKSGLTQLMQEIGQAYRSYG KSLRQTLISLLLGCVQCVKSTLREDVTSLEYLLSHSCIIAASELEELKEAATELEKRKQQ QYSVERKGIDKTVTIDSVIAQKNADERNAETVRGIRESLPATLAVCMVTQLLRSYVERSS TVKHQRKSSCVQLRQMIPELMTCIGITLQKYPYLRFSTAALNLLNLIIRSPYTLHPVNEN DIAKLWLSLIPPSDIGNSMLDSLYNDCPNGKWRCQDWWPLYTLGLEFVIGLVTRETPTIY IKSIVIFFNSHEYQLMVASTLLRHTADLFAADLVQSLVALIHIVATQPYVWNSIQPNVCE TLIKCMYLAYDNTVNLLLRPRILKFIIDGISVESAEELESCDKRSPSGELKLLVNKLIVI NTTCALSFVHFSPRLNTLVDTIYTQDFWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQ LFTQALHSRSQPVSTLSVSLGGQPDKSDSAKKEWEHAAPEDRRMHSSKDLRRIIHAASGS TSRSSSNVASEFLVYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALTSGRHVTK GVSAGNDSPVVAKYQKFSDPWFESMDENNTRFALEVNLVLILCQALEGVRSPRIALRDRQ LIARETVTELGVFFDFLEHRGTPDDWQVKGSLINPDAKSVRTIQQTVDFNQVVLPARLKE TERKELVEDILTTGKFTTNISSVQFLPLMRKLLKTVVESLDLTQYP NT seq 5721 nt NT seq  +upstreamnt  +downstreamnt atgaatgtattgaagatggaagtacctaccgtaggaagtttaccttattgcaaggaatta tggtttttaatatcggatacggtgtgccggtgtgaaaaacaattagtagaagatgaaatt aaaaaggaaactaaactgcttaaagaagggctattattttttaagccatataccgaagca tcgcttcaaaacattcccaaaaatgatccatcccctagaatgtacgaattaattagtaaa ctggctccacttctcaatttagacgccataattacatgggatttagtatgtaattttata aaatacgagtatcgaaattgcgcggaaactttcgcatcgcaacttatagattttacatcg atgaaagcattgatcgacgatatttgggaattttattactctgaaagaatgaccgtgata aagtgccttaaacttatggtcgaatacaaagataaagggcatcgttatcaaaaagaattt gcaaagtttttcgatgatgtcctatttggagcgctattagaatctattcgaaaacagata gaagcgttaaaaacagtaaacccgccgatacgatcgcagctgtgtacagaagagtaccta cacagattatacaacagtagccttatagaaatgcgggaattactgcatatattaacggtc atcattcacgatattcatatcgccgagaccgaatttatgaaattttatgaaagcatcgga ggagaaccaagacgattagcaagtacaaaaagtcacgaagataaaaaagcaattgccaga aaaattaaagaaatacagtatagtcaagcagctttatttttagtaacattagatgtcaga aaacatcccaacatggaagagtggatacagagcgtaagaaagagtatgcaagaaactttt gaacaaaaatgcattcgcgacaattctcctcaagatagtccactattcttatcctggatg ttagcaaattatgccattgatcctgaaaatattgatacgatgaatcgatttagaccattc ggtattaaagctatacaactgaatgtttttcattatttacaagatttaatgaatagcgaa atgatttgtgaaaaaacccattatgctgaaattgtacggagcagtgtatataatcttctt actttggtatgtgctttcgttgacgaagataaattgaacgcgctaaatgatattttcaat gctgtagctgctacaattcaatttagtgaaaccgcggcccgattttgggaagagcgtaac gatggtttgtggctgatttataaattcgcagctgaacagtttccatacgagtttgaaccg ttaacgaacattgcaatcggattggcgagcgcgtcagaattaagtgccgaaagaatcgca atggaactggataatcttcaatcgttaacattggagataccacgacaacgagaccataat aaaccgttgagaccatacgaacaagaatgtacaattcacaaaaactcgtatacgatatta gaaggttgtcctcgtgaaaatatacgtatattgtcaagtgaacgggaagtagtgatattt cgtcaaaaggcaagctattgggacgctttacatcacaagatagaacaacttttttctcaa gcaggtggcagaattacaggaactaatgaaatgaataagaatttgcccgaacacgtctca cagggcttaaaattgttaaaaacattagccaaacgtacatggatacgacaaagtatggtc attccagcagaactaagttttgaaattataaacagattttcttatccagtattacctgaa gagaaaatgtacatatacaaaatagttgcagcttgcatcggtatttcatccgaactcgtg ttggagtatccggaagaaatattgtcgcgaatgcgagctggtgtttatccaagattcaat aatcggtatcaaaaaacattagattttgcagaagcggtttctttcgatggtggtataatt gcgtcgtggttatctgctatagaaacgattgcacactcgtatccaattctaaacgcatat ctagatattttatcgaaatatttaatccgaaagtataacgaggaagctctatatacaata gaaatacctggtatggtatttctattgcaaggtgttttaccgaaattagattcttggtat ttcgatttggacgcggaaagaaccgacttatggttaaaaagtatgttttgccttcataga gcgctcgaatctagtctgccaaaggaggatatacgtaatgaattacaacttgttgtcgcg tatagtttactgtatttagaaccacgacacgcattattaaaactgattcgtactggcgaa cgtactttgcataataaaatgatggcggaaacagattggattcgaggaaagggattcaaa gcgatgaaaagcgtacaattagccttgtccgtggtaaatagattactaatatttcgaaaa tcattgggtcttgaaataagagataggtcaccgttagaggctgccttatattcttcacct cgtgtaccaaacggtctcttaatagtgcctacaattgtgaattatctgtatgtctggttt agtccgcctttgcaagcgatggctgttagactgttgaaaaaatttgccgaaggatcatct atgtcgcttctagtttgtatgggtatggacggtaccgctatacgagagacctttgcctct cgtagagggcttatgtcgccaacctgtgtcgcggatgttaaagtcgctattcttgaactg gttgctgtgtgcctagaaaagcaacccggcctgacggaagctctatttaatatcgtacat ccagcagaatgcaaacgaatatttcctcgatcggtggaagaattttttacagaaggatgc agacaatttctagttaaatacctaaatcgaatctatgaaaaagataacatcgtgtgtgac aaattgtataacagcacgatgacgttattacgagcaatgtggtatcatagaaacgagatt cttgttaacttttttcgaaagcgggagaacttttggactcagttatttgctccgcttttt agagaaatagtaccaggtgtgaaaggttattctcatctgctggatataattactttagag ctattcaaaagtaccacgttggaagacgattttaacacgaacctgaagaaacttttagat aaatcaacggattattggaagaaactgacgatatatatactggacgatgtacacgccgat agcgaagagtcaaacagaaatgagaagcgagatagtaatgttacggattccttgtatgaa actaatttggaatcttggtataattttatcgtcacgttaaccgacgaaagaatagcaaaa aattatcctattaacgtatcccaagcgcaattgataacgcaacgttctttagaatcgtta ttggaacgaatcaaacaatcttataatgtttctagccaaaaaattacaatgttactggcg tctttaacgcttcgatgtatcacttcttggaaacagatgtgcgtcgatgattctagaatt ttcaaatcgggattgacccagctaatgcaagaaatcggccaagcttatcgcagttatgga aagtctttgcgtcaaacgctgatttctctacttctcggatgcgtgcaatgtgtgaaaagc actttgcgcgaagacgtgacgagtctcgaatatcttttatcgcattcctgtataatcgct gccagcgagttagaggagttgaaggaagccgctactgaattggagaaacgaaaacagcaa cagtactcggttgaacgaaaaggtattgacaaaacagtcaccatcgatagcgtgatcgcg caaaagaatgccgatgaaagaaatgcggaaaccgttcgcgggattcgggaaagtttacca gcaacactggctgtttgcatggttacccaattattacgctcctacgtggaacgaagttct actgtgaagcatcaacgaaagtctagctgcgtgcaacttcgacaaatgataccggaattg atgacatgcatcggtattactttgcaaaagtatccatatttaaggtttagtacggccgct cttaatttgctcaatttaatcattcgttcgccgtatactctacatcccgtcaatgagaat gatattgcaaaactatggttgagcctaattcctcccagcgacattggaaacagtatgttg gactcgttgtacaacgattgcccgaatggaaagtggcgatgccaggattggtggccgctc tatacgctcggtcttgaatttgtaataggactcgtgactagagaaacacctaccatctac ataaaatctatcgtcatattttttaattctcacgaatatcaattaatggttgcatcgacc ttgttaagacatacagcggatctttttgctgccgatctggtacaatctctcgttgctctt attcatatcgtagcaacacagccgtacgtttggaattcgatacagccaaacgtttgcgag actctgatcaaatgtatgtatttggcatacgataataccgtaaacttgttactgcgaccg cgaattctcaagttcatcatcgacggtatcagcgtagaaagtgccgaggaattggagtct tgtgacaaaagatcaccaagtggtgaattaaaattactagttaacaaattgatcgtcata aacacaacttgtgcgttaagcttcgttcacttttcaccaagactaaacactctcgtagac actatatatacgcaagacttttggtatactcccatggcggaaatgaacttcggaccacct cagatgagcatgagttccggcccgcgattaacttacggcacgataatcagctcgacacag ttatttacgcaagctttgcattctcgatctcaacctgtgagtactttgtccgtttctctc ggtggccaaccagataaatcagattccgctaagaaggaatgggaacatgccgcgccagag gatcgacgaatgcattcgagcaaagatttaaggaggattatccatgcggcatccggttcc acttcgagatcatcttccaacgtagcgagtgaatttttggtgtacgttagtggcctagat gtaactgtgccactgttaagtagtccaagacttgtgcggagaccgtacgatccacttatt tgtgaaaatactattctgtcaagagcaacggccctgacaagcggtagacacgtaacgaaa ggagtgtctgccggaaatgacagccctgtcgtagcgaaatatcaaaaatttagcgaccct tggttcgaatctatggacgaaaataatacgagattcgctcttgaagtcaatctcgtgtta atcttgtgtcaagccctagaaggggtcaggagtccaagaatcgcacttcgagatcgtcag ctaatagcgcgcgaaacggtgaccgaattaggagttttcttcgattttctggaacatcga ggtactcccgacgattggcaggttaaaggatcgttaattaatcccgacgccaaaagcgta agaactattcaacaaactgttgacttcaatcaagttgtcttacccgccagattaaaagag acagaaagaaaggaacttgtagaagacatattaactacgggaaaattcacaacaaatatc agtagtgtacagtttttacctttgatgaggaaattattgaaaacagtggtggaatcgcta gatttaacacagtatccataa

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