Bombus vancouverensis nearcticus: 117155306
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Entry
117155306 CDS
T07628
Name
(RefSeq) runt-related transcription factor 3-like isoform X1
KO
K20214
RUNX transcription factor Lozenge
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
117155306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvan03000
]
117155306
Transcription factors [BR:
bvan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117155306
BRITE hierarchy
SSDB
Ortholog
Paralog
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Motif
Pfam:
Runt
SOG2
Motif
Other DBs
NCBI-GeneID:
117155306
NCBI-ProteinID:
XP_033187043
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MHLPVGSVGCGENYATVGSHEGAGPCGPSLAPLQGVNTRYQQADDADAGGGGGEMSEGAA
VGELWWTERLVGEAQAEHPGELVRTGSPYFLCSQLPTHWRSNKTLPVAFKVVALGEVVDG
TLVTVRAGNDENCCAELRNSTTLMKNQVAKFNDLRFVGRSGRGKSFSITITVSTTPPQVA
TYTRAIKVTVDGPREPRSKTNIPNRHDAIAKSSLDDLTFEEILGALMLDRSKNNPRSGQT
HIPGLARVPALSRVPGLARGTFPDAPSPFTPYLREPEPYRRNKHHVGNNVTANSVSGACT
NPNNTDPTASPASSTHLGANSGSSAHQDCYKHSPQHGDTSTAAAEWTYPSAASSYPAPPV
SSGGSFSPIPGGAFSYPGEALSHHPTTEPVPLPTVLPSDSQQDTYTPNCVSMYPSHGTSS
TSLPLVPSKTSDPDIFAGGGTGSGSPGYHYGSWTSGPATPVPVASHNYNPNYQGYYNNPS
QNYISPAPMVLYPQLYSTVNQNQIHLHLHGDLSEEQVTIAGSNLTISSNRLEIGVMGEEN
EQRNDVWRPY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaccggtgggttccgtgggctgcggggagaattacgccaccgttggatcccac
gaaggcgccggcccgtgcggcccctcactggcgcctctccagggggtgaacaccaggtac
cagcaggccgacgacgccgacgccgggggaggaggtggcgagatgagcgagggtgccgcc
gtcggcgagctgtggtggaccgagagactcgtcggcgaggcacaggctgaacaccctggc
gaattagttcgaacaggatctccgtattttctatgcagtcaactgccaactcactggcgg
tccaacaagacgcttccggtggcgttcaaagttgtcgccctgggcgaagtcgtcgatgga
actctagtgacagtgcgagcgggtaacgatgagaactgttgcgccgaactaaggaattcc
actaccttgatgaagaaccaagtcgccaagttcaatgacttgaggttcgttgggagaagc
ggcaggggaaaaagtttcagcatcacgattactgtatcaacgacaccaccccaagtggct
acgtatacgagagccatcaaggtgaccgtcgatggacccagagaaccgcgctccaaaacg
aatatcccgaacaggcacgacgcgatagcgaagtcaagtcttgatgatctaacattcgaa
gagatccttggtgctctgatgttggatcggtcgaagaacaatcctcgttcagggcagaca
cacattcctggattggcgcgagttcccgcattatcccgagttcctggactggcacgaggg
accttccccgacgcaccaagcccgttcactccctacctacgggaaccagagccgtacagg
aggaataagcatcacgtcggcaacaacgtcaccgcgaattcggttagtggtgcctgtacc
aaccccaacaacaccgatccgaccgcatcgcctgcttccagtacacacctcggggctaat
agtggctcctcggctcatcaagattgctacaagcacagtcctcagcatggtgatacgagt
acggctgctgcagagtggacttacccatctgcagcatcttcttatccagctccaccagta
agcagtggtggctcgttttcgccaattcctggaggagcgttttcgtatccaggggaagcc
ctttctcatcatcccacgacggaaccggtaccattacccactgttcttccgtcagacagt
caacaggacacgtacacgccgaactgcgtctccatgtatccaagtcacggaacctcgtcg
acctcgttgccattggtacccagcaagaccagcgatccagacatcttcgcgggcggtggg
acaggcagcggaagtccaggttaccactacggttcctggacctctggaccagctacgccg
gtcccggtcgcctcacacaattacaatccaaactaccaaggctactataataatccaagc
caaaattacatcagtccagcgccaatggtcctttatccacagttgtacagcacggtgaac
cagaaccagattcatctgcatctgcatggtgatttgagcgaggaacaggtcacaatcgct
ggcagcaatctgacgatcagcagcaacaggctggagatcggagttatgggcgaagaaaac
gagcaaaggaacgatgtatggagaccttactga
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