KEGG   Bombus vancouverensis nearcticus: 117155359
Entry
117155359         CDS       T07628                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03030  DNA replication
bvan03410  Base excision repair
bvan03420  Nucleotide excision repair
bvan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117155359
   03410 Base excision repair
    117155359
   03420 Nucleotide excision repair
    117155359
   03430 Mismatch repair
    117155359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvan03032]
    117155359
   03036 Chromosome and associated proteins [BR:bvan03036]
    117155359
   03400 DNA repair and recombination proteins [BR:bvan03400]
    117155359
DNA replication proteins [BR:bvan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117155359
  DNA Replication Termination Factors
   ELG1-RFC complex
    117155359
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117155359
DNA repair and recombination proteins [BR:bvan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117155359
  Check point factors
   HRAD17(Rad24)-RFC complex
    117155359
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 Rep_fac_C AAA AAA_11 ATPase_2 AAA_16 T4SS-DNA_transf VHS ABC_tran AAA_30
Other DBs
NCBI-GeneID: 117155359
NCBI-ProteinID: XP_033187149
LinkDB
Position
Unknown
AA seq 355 aa
MSLWVDKYRPTVLGKLDYHKEQAEYLKNMIQKGDFPHLLVYGPSGAGKKTRIMCIIRELY
GSGVDRLRMETMTFETPSKKKLEITTISSNYHIEVNPSDVGIHDRIVVMDLVKTTAQTHQ
IDPSGQKEFKVVLLTNVDQLTKEAQHALRRTMEKYVTTCRLILCANSTSRVLPAIRSRCL
GIRVPAPSTSDIKDILHSICKREGLTLPDELATRLAECSGRNLRRAILMLEACKVEQYPF
TADQSITEPDWQVYIRNTANMMVSEQNPKKLLTIRNRLYELLTHAIPCDLIFKGLLQECI
KNCDLQLKIEIATVAAEYEHRMHRGSKPIFHLEAFVARFMAIYKKFIDSSLEGFV
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtctctgggtagataaatatcgcccaacagtacttggaaaattggattatcataaa
gaacaagcagaatatttaaaaaacatgatacaaaaaggagattttccacatttattagtt
tatggaccatcaggggcaggaaaaaagacccgtataatgtgtatcataagagaattatat
ggaagtggtgttgacagattaagaatggaaactatgacatttgaaacaccttccaagaag
aagctagagataacaacaataagtagcaactatcacattgaagtaaacccaagcgatgtt
ggtatacatgataggatagtagtgatggacttggtaaaaacaacagctcaaactcatcaa
atagatcccagtggacaaaaagaatttaaagtggtattactgactaatgtggatcaactt
acaaaagaggcacaacatgctcttcgaagaacaatggagaaatatgtcactacatgtagg
ctaatactttgtgcaaattcaacatctcgtgttctgccagctatcagatcacgatgtttg
gggattagagttccagcaccatcaacatcagatataaaagatattttgcattcaatttgt
aaacgcgaaggtttaactttaccagatgaactggctacaagattggctgaatgtagtggc
agaaatctccgacgagcgatattaatgcttgaagcttgtaaagttgagcaatatccattt
actgcagaccaaagtattacagaaccagattggcaagtgtatattcgtaatacagcaaat
atgatggtcagtgaacagaatccaaagaagcttcttacaataagaaacaggctctatgaa
ttattaacacatgctataccatgtgatttaatatttaagggtcttttacaagaatgtata
aaaaattgtgatcttcagctaaaaattgaaattgcaacagttgcagcagaatatgaacat
agaatgcacagaggatcaaaaccaattttccatttagaagcatttgtcgcacgatttatg
gcaatttacaaaaaatttatcgattcatctcttgaaggttttgtgtga

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