Bombus vancouverensis nearcticus: 117155436
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Entry
117155436 CDS
T07628
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvan03036
]
117155436
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bvan04812
]
117155436
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117155436
Cytoskeleton proteins [BR:
bvan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117155436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
Cnd1
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
Adaptin_N
INTS1_R4
Arm
Tti2
HEAT_ECM29
Ipi1_N
RICTOR_N
Sec7-like_HUS
Arm_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117155436
NCBI-ProteinID:
XP_033187257
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MAVNPRDMDGFMPLLSTTDIKKKLNVGSLLLNYLGDATKSIECQDIGQFIDNIIPWLSNG
NPKVVQNGLEILTFLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQQLLDRLRPAFSHKNAKLREEALILLTTTLNEHGADEMILSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKLLLLIEKFDQLKAAGDLLPLAMSSD
VGKTTDETDRAIKSAPVKRLAAAAAAAPPKRGQFGPAKAPSSALAQPGNTSSMVPRATTV
KRNVSVKPTPGQAGAVDEETFLTAFEDVPSVNLFSAKDLEEQMKIIRENVGDDKKDWKQR
TESMKKLRAIVIAGGTNYENFLENLKSVQRSFEVACTDLRSQVVREACITLAFLSQQLKN
KFASFGEAVLLTLMNLIQNSAKVVATAGAVAVRFILQNTHYSRFVPIITSCLSHKSKDIR
RASCEYLNLILQIWPTQILQKHLTILQDTIKKGIADSDSEARAFARKSYWAFKDHFPEQA
EALLNSLDTAYKRSLMSLSNSGSINSLNVVTRSASVSPRTSRPVMSATGSTENLHQSSGQ
PHGPLRRTPSLPRSYRQSGIPVLQRPTDSHYRATPGVRSTSAIDLQAAQRAKARMMYANM
SRQKASLPRPSKSPDTTAVASPERTARTRTRVSGVSQSQPSSRSGSPSSRLSYATYNREG
ESLIARPRRLSGHGIRSTGNSREPSPQRFGMDRSFASKIRGRSLHMSPTDRPQSRPVMAQ
KMLQQSREAESALADALTFENIDNYPRTPRGKGDHSDDSETSSICSERSMDSFRRPNDSF
SWSGSQQRLYRDMWDQSIPKDIKEIIENCAHKHWGDRKEGLVGLQHFLSNGNTLTATELR
KVTDIFTKMFMDSHTKVFSLFLDTLNELVATHSEDLGDWLYVLCARLLNKLGTDLLGSIQ
AKIHKTLEVVRECFPGEQLLPAVMRYLTDPTQTPNSRVKIATLVFITQIAETAEPSALIN
SAGTALARLLDWSNDVKSQDVRRHAQNAVISLYNLNPPKVTMILAELPKYYQEAALPLVQ
NHLRKSSGSSNPASPGTPPPRAQSSPARSKGKGDIDNADENLEEVYKSLRRTTAEIQNYG
FERLERATTSKDSGISNMADVEEKMEGLTLCNSGRSSSVSSPTQRGRSVTNITVNGSSDT
IAGDLILPQENNGYKTHGSSPDSIKRPEVLDNMIKTLQSKMTQTEEKVSALQEFQLYVRE
GDALYIKQNFKKLLKTLLDSLTNDSKKMQVEVLQTLIDMLKCPELVDSFSVYPELLVLKV
INAYKLDDQKQDSSTSSNSRSPVLWMAEKCAATIAMVLKPEQVIHLVSTIITTEPYPLNM
GAIKMLHKVVEHWGRDAIEPHLSKVMPGLIKAYDDNESAVRKSAVFCMVAIHLAVGEELL
KPHLSCLYTSKLKLLNIYIQRAQQANSQPASPRSNSKN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatccgcgtgatatggacggttttatgccgctcctgtcaacgactgacatc
aagaaaaagttaaacgttggtagtttgctgttgaattacttgggagatgcgaccaagagc
atcgagtgtcaagacatcggacagtttatcgacaacatcataccatggttgagcaacggc
aaccccaaggtcgtgcagaatggtttagaaatcctcacgtttctcgcggatcgaatgggt
cacgacttcaagccttacatttccactattattcagccaacgatagacagactaggtgac
agcaaggatgcgacacgggaaaaggcgcaactggtgcttctcaaaataatggagaaaggg
tgtatgtctcctcaacaactcttggacagactgcgaccggcctttagtcacaaaaatgca
aagttacgagaggaagccctgattctactaaccacgacgttgaacgagcacggcgctgat
gaaatgatactgtccggagtgattccaagtatcgtgaaattattatcggatccatccgaa
aaagtgcgagaaactgctttaaacacattggcggatatctacagacacgttggtgaaaga
ttacgagtggatttgcagagaaagcacaatgtaccgcaagctaaattgctgttgctgata
gaaaaattcgatcagctgaaagccgctggcgacttactgcctctggccatgtcttcggac
gttggcaaaaccaccgatgaaacggacagagcgattaaatcggctcctgtgaaaaggtta
gctgctgctgctgctgctgctcctccgaaaagaggacaattcggtcctgcgaaagctcca
tcttcagctctagctcagcctggtaatacatcttccatggttccaagggctacgaccgtc
aaacgaaacgtgtcagtaaaaccgacaccaggtcaagctggcgccgtcgacgaggaaact
ttccttacagcgttcgaagatgtgccatctgtaaatttgttttccgcaaaagatctcgaa
gagcagatgaaaatcataagagaaaatgttggtgacgataaaaaagattggaaacaaagg
acagagagtatgaaaaaattaagagcaatcgttatagcgggcggtacgaattacgaaaac
tttttagaaaacttgaaaagcgtgcaaagatctttcgaagttgcttgcacggatcttagg
tcgcaagtggtaagggaggcgtgcattaccttagcgtttcttagtcaacagttaaaaaat
aaattcgctagttttggagaagcagtcttactcaccttaatgaacctcatacaaaatagt
gccaaggttgtggcaacagctggtgccgtagccgtgaggtttattcttcagaatacgcat
tacagtcgtttcgtgccaattatcacatcctgtttaagtcacaagagcaaagacatacgt
cgagcatcgtgcgaatatctaaatctaattttacaaatatggcctactcaaatattacag
aaacacttgaccatcttacaagatacgatcaagaaaggtatcgccgactcggattcggaa
gcaagagcctttgccaggaagtcatattgggcattcaaagatcattttccggaacaagca
gaggcattgctcaacagcctcgacaccgcgtacaaacgctcgttgatgtcccttagcaat
agcggtagcattaacagtctgaacgtagtgacgagatcggccagcgttagtcctcgaaca
tccagaccagtgatgagcgccacaggtagtacggaaaatttgcatcagtcttcgggtcaa
ccccatggcccgctcagacgaactccctccttgccacggtcttatcgtcagtctggtatt
ccagttctccaaagacccactgatagtcattatcgtgcaactccgggcgttagatctact
agcgcgatagatttgcaagccgcgcaaagagctaaagcgagaatgatgtacgcgaatatg
agcagacagaaagcgtcccttccacgacctagcaaatcaccggacacaaccgccgttgct
agtccagaaagaaccgcgagaacaaggaccagagtatccggagtgtcgcaatctcagcct
agcagcagatcgggatcaccgtcctcgagactcagttatgcaacgtacaatcgcgaagga
gaatcgttaattgcaagacctagacggttatccggccacgggatcagaagtaccggtaac
agtcgtgaaccaagcccgcaaagatttggaatggatagaagtttcgcgagcaaaatacgg
ggaagaagtttacatatgtctccgacggacaggcctcaatccagaccagttatggcacaa
aagatgctgcagcagtcgcgtgaagcggaatcagcgttggcggacgcgcttaccttcgaa
aatatcgacaattacccaagaacaccgagaggaaagggcgatcacagcgatgacagtgaa
accagcagcatatgctccgaacgaagtatggacagctttaggcgaccaaacgattcgttc
tcatggagtggctctcaacaaagactgtatcgtgatatgtgggatcaatctatcccaaag
gatatcaaggaaatcatagagaattgcgcgcataaacattggggcgataggaaagaaggt
ttagtcggattgcaacattttctgtcaaatggaaatacgcttacagccacggaattgcgc
aaagtaacagacatctttacgaaaatgttcatggattctcatacgaaagtattcagttta
tttttggacacactgaatgaattagtagctactcacagcgaagatctcggtgactggctt
tatgttttgtgtgctcgacttttgaataaattaggcaccgatttacttggctcgatacaa
gcgaaaatacacaaaacgctcgaggtggttagggaatgcttccccggagagcaacttttg
ccggctgtaatgaggtatctgacggatccaacgcaaacgccaaattctcgtgtaaaaata
gccacactcgtgtttatcacgcaaatagcagaaacggcagaaccgtctgctcttattaac
tctgctgggacggcgctcgcaaggttgctcgactggtcgaacgacgttaaaagccaagat
gtcaggaggcatgcacaaaatgctgttatatcgctgtataatttgaatcctccgaaagtc
actatgatattagctgaattacccaagtattatcaggaggcggcactgcctttagtgcaa
aatcacttgaggaaatcgtcgggttcgagtaatcccgcgtcccctggaactccgcctcct
agggcgcagagctcaccagctcgttcgaaaggtaaaggtgacattgacaatgcggatgaa
aacttggaagaagtttataaatctttaaggcgtacgacggcggagatacaaaattatggt
ttcgaacgtttagaaagagcaactaccagcaaagacagtggaatcagcaatatggctgat
gtcgaggaaaagatggaaggacttacattatgcaactcgggtcgttcgtcttctgtttct
tcgcccacgcaaagaggacgatctgtgactaacattacagttaatggttcaagcgatacg
atcgccggggatcttatcctacctcaggaaaataatggttacaaaacgcatgggtcatca
cccgattcgataaaaaggccagaagttttagataatatgattaaaacgttgcaatccaag
atgacacaaaccgaagaaaaagtatcagctctacaagaatttcaattgtacgttcgcgaa
ggagatgctttgtacattaaacagaattttaaaaagctgctcaaaacgttgttagatagt
ttgactaacgatagcaagaaaatgcaagtagaagtacttcaaactttaatcgatatgctt
aaatgtccagaacttgtcgacagtttttccgtctatcctgaattgctggttttaaaagta
attaacgcgtataaattagacgaccagaaacaagattcttccactagtagcaattcaaga
tctccagttctctggatggcggaaaaatgtgctgcaacgatagcgatggttctaaagcca
gaacaagtgattcacctagtatcgactataataactaccgaaccatatcccctgaatatg
ggcgcgataaaaatgcttcacaaggttgtggaacattggggtcgcgatgcgatagaacct
catttgtcgaaagttatgcccggtctcatcaaagcgtacgatgacaatgaaagcgcggta
cgtaaaagcgctgtgttttgtatggtagcgatacatttggcagttggcgaagaattgttg
aaacctcatctcagctgcttgtataccagcaaactgaagcttttaaacatttacatacaa
cgcgcgcaacaagcgaacagtcagccggcaagcccacgtagcaatagtaaaaattaa
DBGET
integrated database retrieval system
