Bombus vancouverensis nearcticus: 117155725
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Entry
117155725 CDS
T07628
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03022
Basal transcription factors
bvan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117155725
09124 Replication and repair
03420 Nucleotide excision repair
117155725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117155725
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117155725
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117155725
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117155725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
117155725
NCBI-ProteinID:
XP_033187893
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSIFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKSQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGIDDPLVDITSFEDQTLDDNYGNGPSKSDKVSGNIVHQSM
IKRFNQHSIMVLKASTAKQSTQSIQPQLNGSTPSASKTTTLSNQLDERPKTKKLRIQEKL
IYDDLDTTHDINTNNSAPLNLNHIDRYLHGPVPGYGNTEPTSEELLMTLNQLRKEVNGWL
AGNSIPRQLATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLEKELRNVYVCT
CELLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSAKLKPFEDRVQRDFSAVSQHLTSHLN
QLLNTAYRKFAVWQQRKMQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttctaatgcaagtaggacaagttcgttataaaaaagga
gatggcactttatatgtcatgaatgaaagaatagcctggatgcttgataacagagacact
gtatcagtcagtcacaaatatgctgacattaagttacaaaagatatcaccagaaggaaaa
tcaaaaatacaattacaagttgtattacatgatggttcatcgtctatatttcattttgta
aacagaaatgggcaagaggcacaaattaaagatcgtgatgatgtaaaagaactacttcag
caattattaccaaaatttaaaagaaaagtaaataaagaattggaagaaaaaaatagaatg
cttcaagaaaatcctgtactgcttcagttatacagagatttggttattacacaagttatt
tcatctgaagaattttggtcacaacatgctgcagaatatacccaagctaaaaaaagtcaa
agacaagaaataggagtaaatagtgcttttctggctgatataaaaccacaaactgatggt
tgtaatggattgaaatataatttaactgttgatattatagagtgtatatttaagacttat
ccagcagtaaaaagaaaacatcaagaaaatgtgcctcataaaatgtcagaatccgatttt
tggacaaaattctttcagtcacattattttcatcgagatcgtatcaatgcagggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaacttaaaaaagatattcaatcg
ggtattgatgatccattggtggatataacttcttttgaggatcaaactctagatgataat
tatgggaatggacctagtaaatctgacaaagtttcaggaaatattgtacatcaaagtatg
attaagagatttaatcaacacagtatcatggttttaaaggccagcactgccaaacaatct
acacaatccattcaaccacaattaaatggatcaacgccatcagcaagtaaaactacaaca
ctgtctaatcagttagatgaacgaccaaagactaaaaaacttagaatacaagaaaaatta
atttatgatgatcttgataccactcatgatattaatacaaataatagtgcaccattaaat
ttgaatcatatagacaggtatttacatggtccagtgccaggatatggtaatacggaacca
acgtctgaagaacttcttatgacattaaatcaattaagaaaagaagtaaatggttggctg
gcaggaaatagtataccaaggcaattagcaacatcattagttagtccagctgcagcagtc
tctgccttaggagaattaactccaggtggttctttaatgaaaggctttagagaagaaagt
cttggacaattaataccaaaggatttagaaaaagaactacgtaatgtatatgtgtgtaca
tgtgaacttctaaggcatttttggcgaagtttcccacctacaactccacagcttgaagaa
aaagccattagaatgcacgaagcattacatagatttcattccgctaaacttaaacctttt
gaagatcgtgttcaacgagatttttctgctgttagtcaacatttaacaagtcatttaaat
caactattaaatacagcgtatagaaaattcgcagtttggcaacaacgtaagatgcaaatg
aggtag
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