Bombus vancouverensis nearcticus: 117156001
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Entry
117156001 CDS
T07628
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117156001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156001
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117156001
mRNA degradation factors
5'-3' decay
Lsm complex
117156001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117156001
NCBI-ProteinID:
XP_033188511
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MNILPGTASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIP
RGIFIVRGENVVLLGEIDRDKERDLPLTEVSVDDILDAQRREQELKQDQKRLINKTLKER
GLSYIPDMGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttgccagggacggcatctcttctcgaagaacttgacaaaaaacttatggtt
ttactaagagatggcagaactttaattggatatcttagaagtgttgatcaatttgctaat
attgtacttcatcgtacaattgaaagaattcatgttggcaaagaatatggagacatccca
agaggaatttttattgtcagaggagaaaatgttgtccttttgggagaaatagacagagac
aaagaaagagatttaccattgactgaagtatctgttgatgatatcttggatgcacaaaga
cgagagcaagaattaaaacaagaccagaaacgactaataaataaaactctgaaggaacga
ggtttatcatatattccagatatgggtcatgatgacatgttctga
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