Bombus vancouverensis nearcticus: 117156049
Help
Entry
117156049 CDS
T07628
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117156049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156049
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117156049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117156049
NCBI-ProteinID:
XP_033188626
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MDSQYKIIHPVKYLQDHLAQDIRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTVVC
GIKAELAAPKAESPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAID
LKDLCVYKGKLVWVLYCDLVCINYDGSIIDACIGALTATLSTLTLPETLYNVETGRVSVN
STKRIRFLVKALPVSITFAIFNDQLLVADPTDDEESLCLGRLTIVMNEEKICCIHKPGGI
PISQDLFSKSLSKCKKRAELIRSLIDAAISTIKQETFK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaatataaaattatacatcctgtgaaatatttacaagaccatttggcacaa
gatattcgaccagatggtaggcagtttttatcttttcgcccaataagtgtaaatatatca
tcaattactcatgccgatagctcagccatattcaaaattggtaacacaacagttgtatgt
ggtattaaagcagagttagcagcacctaaagcagaatctccggagtgtggttacattgtg
ccaaatattgaacttcctccattatgttctcctaaatttcggccaggcccaccaagtgac
caagcacaagtcattacaaaattagtagaaaatattttaagaaattcagcagctattgat
ttaaaagatctttgtgtctataagggtaaactagtatgggtcttatactgtgaccttgta
tgtattaactatgatggttcaataattgatgcttgcattggagcattgactgctacactt
agtactttaaccttacctgaaacactttataatgtagaaactggaagagtatctgtaaat
tccacaaaaagaataaggttcctggttaaagcattaccagtttctataacttttgcaata
tttaatgatcaattattggttgccgatcctactgatgatgaagaaagtttatgtttagga
agattgacaattgtaatgaatgaagaaaagatttgttgcatacacaaacctggtggaatc
ccaatttcacaagatttgttttcaaaaagtttaagtaaatgtaaaaaaagagcagagttg
ataaggtcattaattgatgctgctatatcaacaatcaaacaagaaacttttaaataa
DBGET
integrated database retrieval system
