Bombus vancouverensis nearcticus: 117156070
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Entry
117156070 CDS
T07628
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117156070
03015 mRNA surveillance pathway
117156070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156070
03041 Spliceosome [BR:
bvan03041
]
117156070
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117156070
Spliceosome [BR:
bvan03041
]
Complex C
Other components
EJC/TREX
117156070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
117156070
NCBI-ProteinID:
XP_033188671
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MRKLDTQEAWGAESLEAQLEAARDGLRGLDRSIRKILGRDLPDGENGPLQPPPRLSQKRP
LQEDRRRVVSDFVNNELPGGKRRWQGSNGEPKTVFSRLSARVPSNNDDSADEDDNVIKPA
VSSRVIATPREIPSRQEVIRRERIDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKK
AEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRAAQLPLA
SFIKTRAQPPIYYVPKRKHPQTDILLGQSAKELHEEIERREKVLIDELEAIELQVGLGKH
QQNFDGSATLNATAEVPQSTEEGEENRDPNPEKNLESENNEPADVPIKSDKDENYENTND
IENKEEVKVDEAKDENNG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattagatacacaagaggcctggggtgccgaaagcttagaagcgcaattagaa
gccgctcgagatggtcttcggggactcgatcgaagtattcgaaagattttgggccgggat
ctccctgatggagaaaacggcccgctacaaccaccacccagattatcacaaaagagacca
ttgcaagaggatagaaggcgtgttgtttctgattttgtcaacaatgaactacctggtgga
aaaaggagatggcaaggttcaaatggtgaaccaaaaacagttttcagtcggttaagtgca
cgtgttccttctaataatgacgatagtgctgatgaagatgataatgttattaagccagca
gtgtcttcgagagtgatagcaacaccaagagagattccatctagacaggaagttattaga
cgggaaagaatagatgaacgtagcagacaaaggaataaacgaatgtttggtgccctttta
ggaacattacagaaatttcggcaagaagaaactaaactgaaagcaaaggaagataaaaaa
gcagaagtagaggcaagagtagaagaagccagaaggagagaaaaggaagaattacgacga
gaaagacaacaattattcttatcgcgtaaacggcaactagcagaagtccgagcactagag
gcaaaattggcgcgcagccgacaatttcaagattggcgcgcggcgcaattaccacttgct
tcgtttataaaaacgcgtgcccaacctcctatttattacgtaccaaagcgtaaacaccca
caaactgatattctactagggcaatctgcgaaagaacttcatgaggagatcgaaagaaga
gagaaggtattgatcgatgagctggaagctatagaattgcaagtaggtctcggaaaacat
caacaaaattttgatggatccgcaacgttaaatgcaacagctgaagttccacaatcgacg
gaagaaggagaagagaatcgtgatccaaatccagagaagaatttagaatcagagaataac
gaaccggctgatgttcccataaaatccgacaaagatgaaaattacgaaaacacgaatgat
attgaaaacaaggaggaagtaaaggtagacgaagcaaaagatgaaaataatggctag
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