Bombus vancouverensis nearcticus: 117156089
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Entry
117156089 CDS
T07628
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117156089
03015 mRNA surveillance pathway
117156089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156089
03041 Spliceosome [BR:
bvan03041
]
117156089
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117156089
Spliceosome [BR:
bvan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117156089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117156089
NCBI-ProteinID:
XP_033188704
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGME
DDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNARSFMGELWDLLVSAQESVTGIPEAF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDEAESKIKKEEKERGSSKERRRDRS
RDRDRDRKRSRSRDRHRDRDRSSRKRRSSSRSPSKNSLKDNGKDMTEIKVEREDSPQPEN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESLEKAKKSRSRSKSPISRS
KKSRSKTPSRDSKSRRSRSPASKSRRSRSKSRSRRSRSRSKSRRSKSRSQDRSKSRRTKS
KSPRSHSRSRSRSKKSRSKSIDRSKSRKSRSDSSDSRSSKSRSKSPDKRKDTLDSNRKRD
ASTSSSSESEEEKGAKDKNDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRERKSVPKR
RSPTPRKDRGRSKDRDRSRDRSRDRSRDRSRDRSRDRNRRRSIDRERERRRERERERERE
RLDRYSGSRSMRPPSVRRAPSRRRSPPRRSPARYRRRSPSPGDRRRRRSLDRRRRSSERR
DRRRSPDRRDSRRRSPDGRDRSLRYDRSSSRDRSSRRDRSRDRDRRDRDRRSRSRDRRSR
SKDQRSSVDHSRDGKRSPDRSRDAKEKTKDKKVDEKIKRSTDTGSRKELRNGRSKSSSSE
SSESSSSSNEDEVTRKSLERKSSQEKRERERDREHADEKRKEKEKPIKEESIKRPEKDIK
KAEPVNIKKPDLSVSPKKLQSATLPVTRHRFSKSLSRTPSPFKKTEDIIAAVKVKQPSKE
DNKEESPKEESSFSSADTFPLKKDEKSIKSIKTTSEDKKSGQKSAEPVLLKKPAEVIKKS
KREKRDGSTDSNDSESEGKKRSKKLEKSKKSRKASTDEEKSDKCGSSSDSEEERKHAEKT
KKIRDSNRGDSLDERTKDRKDSRKREMNENESRKRPKKELEEETKKSKRSRKDSSSGDEE
QKIKRNKTEDDRSRLRKSKKDSSSDDEPKKTRKRRDSSSEDEKSRTRKSRKDSTSEDEGK
VRLKKSKRDSSTDDEEIGEKDAKKKRKADDSSDEEKVKKKRKKKTKTSTSESEESEVEEK
KKKKDKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKSMKKGHSIE
GSD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacggggactaccgcgtcgcaagacacgaggttcagcgataaggagaagaaa
cttcttaaacaaatgaaatttggagactctcttacacagaaggtggatatgagtaaagtt
aagctggatgttattaaaccatggataaccacaaagattacccagattttaggcatggag
gatgatgtagtggtagaatttgtatataatcaactggaagaaaagtttcctgacccccga
aaaatgcagatcaacctcactggctttctgaatggaagaaatgctcgatctttcatgggt
gaactatgggacctcttggtctctgctcaagaaagtgtaacgggcattccagaggctttc
ttgcaacaaaagaaagatcaaataaaaaagcgtttggaagagcaggagaaactccaagct
tctttggcggagaaagaaaaggaaaaggaaagggagaaagaaaaagatgaagccgaaagc
aagataaaaaaagaagagaaagaacgtggttcttcgaaggaacgtcgaagagatcgaagt
agagatcgtgatagagacagaaaaagaagtcgatcgagagatcgacacagagatcgtgac
agatcgagccgcaaaagacgatcttcttcgagatcgcctagtaaaaattctcttaaagac
aacggaaaagatatgactgaaattaaagtcgaacgagaagattcacctcaacctgaaaat
gctataccgctcatgccagttaagacaaaaccggaagccgctgttgcgatatcgcgatta
caagctaaattaatgagcattgctgatgggaaaaagaaaaacaatcgtactccatctcct
gaatcattagaaaaagcaaaaaaatctagatctagatcaaaatcacctataagtcgctcc
aaaaaatctaggtccaaaacgcccagccgagattcaaaatcacgtcgttctcgatcacca
gcatctaagtcgaggcgatctcgatctaagtcaagatcaagacgatctaggtctaggtca
aagtctagaagatccaaatccaggtcgcaagatcgctcgaaatctagacgtacaaagtcc
aagtctccaagatcgcattcaagatctcgttcacgatctaaaaaatcaagatcgaaaagc
attgatagaagtaagtctagaaaatcgagatctgattcaagcgattcaagatcatcaaaa
tctcgttcgaagtcaccggataagagaaaggatactctcgattccaacaggaaacgagat
gcaagtacaagcagtagctccgaatcagaagaagaaaaaggagcgaaagataaaaatgac
ttcgaaattagaaagaagaaagatggagtacaggcaaaaagatcatataggaaaacaaat
aaggatgatagtggtagtgacagtgactcgagtcgtgaaagaaaatcagttcctaagcga
aggagtccaacgccacgaaaagatagaggtcgatcaaaggacagagatagatcgcgagat
agatcacgcgatagatcacgggataggtctcgggatagatctcgagataggaatagaagg
agatccatagacagagaacgtgaaagaagaagagaacgggagcgagaaagggaacgggag
agattggatagatacagcggcagtcgcagcatgcgacctccatctgtgcgcagagcacct
agtagacgcagaagccctcctcggagaagcccggcacgatatcgtcgcagatcaccaagt
cccggagataggcgccgaaggagatctctcgatcgaagacgaagatcatcggaaagaaga
gacagacgtcgatctccggatcgtcgtgatagcagacgtcgttcgccagacggacgggac
cgatccctcaggtacgatagatcttcctctcgtgacagatcgagtaggcgagaccgttcc
agagacagggacagaagggatagagatagaagatctagatctagggatcgtaggtctaga
tcaaaagatcaaagatcatcggtggatcattcgagagatggaaaacgatctcccgatcgc
tcaagagatgctaaggagaagacaaaggacaagaaagtggatgaaaaaattaaaagatca
actgatacgggatcgcgaaaagaattacgaaacggaaggtctaagtcaagtagctcggaa
agtagcgaaagtagttcctctagcaatgaggatgaagtgaccagaaagtcactagagcgg
aaatcgtctcaagaaaagcgagaacgcgagagggatcgtgaacacgcagatgagaaacgt
aaagaaaaggagaagcctatcaaggaggaatccatcaaacgacccgaaaaggacatcaag
aaagctgaacctgtgaacatcaagaaaccagatctcagcgtttctcctaaaaaacttcaa
tctgctacgcttcctgtaactagacacaggttttcgaagagtttatctagaacgccgtct
ccgtttaaaaagactgaagacatcatagcagcggttaaagtcaaacaaccatcgaaagaa
gataacaaagaggaatcaccaaaagaagaatcgagcttttcatctgcggatacgttcccg
ttaaaaaaggatgaaaaatcgatcaaatcaatcaaaactacatccgaggacaagaagtca
ggtcaaaaatcggcagaaccagttctcttgaaaaagccagcagaagtaataaaaaaatcg
aagagggaaaagcgcgatggttctacagattcaaatgatagtgaaagcgaaggtaagaaa
agatcaaaaaagttagagaagtccaagaaatccaggaaagcttccacggatgaagagaag
tcggacaaatgtggttctagttcagactctgaagaggaaagaaagcacgcagagaaaacc
aaaaaaattagggattcgaatcgaggtgattcattagatgaacgtacaaaagacagaaaa
gatagtagaaaacgggaaatgaacgagaacgaatctcgtaagcgaccgaaaaaagagtta
gaagaggaaacgaagaaatcaaaaagatctaggaaagattcctcttcgggagatgaagaa
cagaagataaaaagaaataaaactgaagacgacaggtccagattacgaaaatccaaaaaa
gattcgagttcggacgatgagccgaaaaagacacgaaaacgaagagacagttcttcggaa
gatgaaaagtcaagaacgaggaagtcaagaaaggattctacaagcgaagacgaagggaag
gtacgtttgaaaaaatctaagcgagactcaagtacagatgatgaagagattggagaaaaa
gatgcgaagaaaaagagaaaagcggatgacagttcagatgaagaaaaagtgaagaagaaa
cgtaagaagaagactaaaactagcactagtgaatcagaggaaagtgaagtagaagaaaag
aaaaagaagaaggataaaaagcacaagaaacataagaagcataagaaacatagaaagcat
aaaaagaagaaggttgcagattccgacgaatctgatgtaagtgaaggtaatacagaagaa
ttagaaaaaaaacttcgcgagaaagcattaaaatcgatgaagaaaggacacagcatagaa
ggaagtgattga
DBGET
integrated database retrieval system
