Bombus vancouverensis nearcticus: 117156273
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Entry
117156273 CDS
T07628
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03420
Nucleotide excision repair
bvan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117156273
09124 Replication and repair
03420 Nucleotide excision repair
117156273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117156273
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117156273
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
117156273
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117156273
TCR (transcription coupled repair) factors
Cul4-CSA complex
117156273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
117156273
NCBI-ProteinID:
XP_033189038
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MKAMSHHYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGI
YGKIAVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIGKASE
TGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFLHGCANPT
LILIHQDINGRHVKTHEISLRDKEFVKVPWRQDNVEREAMIVIPVPSPICGAIIIGQESI
LYHDGNTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFVEQEKKPDGTQVV
KDLKVELLGEISIPECITYLDNGVIFVGSRLGDSQLVKLITKADENGSYCVPMETFTNLA
PIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKVGG
GNFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL
ISHETKTVVSEWEPENKRTISVVACNGTQVLCATGNDLFYMEISCGQIVPKGFATLQYEV
ACLDISPLDGHTEAKIAAVGLWTHISVRILTLPALEEINKELLGGEIIPRSILMTCFEGN
TYLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGE
SPRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASYNKPTGHTA
SDICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVGTALVHPD
ETEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFEWTAEKEL
RLECSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEI
LDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGE
SSTPTQGCVLFGTVSGAIGLVTQIPFTFYEFLRNLEERLTGVIKSVGKIEHNFWRSFNTE
LKIEQCEGFIDGDLIESFLDLSPNKMADVASGLMIDDPSGMKKEATVDDLVKIVEDLTRI
H
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgatgtctcatcattatgtggtaacggcacacaagcctacagctgtcactgca
tgtgtgacaggtaattttacttcgcctacggatttgaatctcatcttagcaaaaaatgtc
cgattagaaatatatcttgttactccagaggggttaagaccactgaaagaagttggaatt
tatgggaaaattgcagtcgttaagttttttaggccgccgcatgagaaaaaagatctattg
tttcttttaactacacgttacaatgctatgattttggaatgtattggagaaggagaaaat
atagaaattataacaaaagcacatggaaatgtagcagatcgtattggaaaggcttctgaa
acaggaatcaaagctgtgattgatcctaaagcacgtgtaattggtttaagattatatgat
ggtctttttaaaattatacctcttgacaaagacaatccagaattaaaagcatcatcaata
cgtatggaagaacatcaagtacaagatgtgaattttcttcatggatgtgctaatcccact
ttaattctaattcaccaagatattaatggaagacatgtcaaaacacatgaaatttcttta
agagacaaagaatttgttaaagtaccttggagacaagacaatgtagaacgtgaagctatg
atagtcattcctgtaccttcacctatttgtggtgcaataataataggccaagaaagtata
ttgtaccatgatgggaacacgtatgttgcagttgtacctccaattataaaacagagtact
attacatgctatgctaaagttgataatcaaggacttcgatatttgttaggagatatggct
ggacatttgtttatgttatttgtggaacaagaaaagaaaccagatggtacacaagtagtg
aaagatcttaaggttgaacttctaggagaaattagcatacctgaatgtattacatattta
gataatggagtaatatttgttggtagtagattgggtgattcacaattagttaaattaatt
acaaaagcagatgaaaatggttcgtattgtgttccaatggaaacttttactaatttggca
cccatagttgacatggcagtagttgatcttgaaagacagggacaaggacaaatggttaca
tgttctggagcttttaaggaaggttctcttagaattattagaaatggaataggtattgaa
gaacatgcaagcatagatttaccaggtattaaaggtatgtgggcattaaaagttggtggt
ggtaactttgacaacaccttggtcttatcttttgttggacaaaccagaattttgacttta
aatggagaagaagttgaagaaacagatattccaggctttgttgccgatgaacaaaccttt
catactggtaatgttacaaatgatttatttattcagataacaccaacatctgccagatta
atttcacatgaaactaaaacagttgtttctgaatgggaaccagagaataaaagaactatt
agtgtagttgcttgcaatggcacacaggtactttgtgctactggaaatgatttattttat
atggaaatttcatgtggacaaattgtaccaaaaggatttgctactttacaatatgaagtt
gcttgtttagatatatctccattggatggtcatacagaagcaaaaattgcagcagtaggt
ttatggacacatatttctgttcgtatcttaactttacctgccttggaagaaattaacaaa
gaattactcggtggtgaaattatacctagatctattttaatgacatgtttcgaaggtaat
acatatttgctttgtgctcttggagatggtagcatgtattactttactttacataaacaa
aatggtatactttctgacaaaaagaaagttaccttaggtacgcaaccgacggtcttaaga
acttttagatcattattcaccactaatgttttcgcatgttccgataggcctactgtaatt
tattcatcaaatcacaaactagtattcagcaacgttaacctaaaggaagtaaatcatatg
tgttctctaaatgcagaatcatatccggatagtttagcattagcaaccgatagtacagtg
acaatcggaacaatcgatgaaattcaaaaattacatattcggactgtccctctcggggaa
tcaccgagacgaattgcttatcaggaaagttctcaaacatttggagtaataacgatgcgt
gttgatatccaggatagtagcggtgttagtattgtaagacattctgcatctacacaagca
gcttcaacatctagcagcagtcacattgcatcttacaataaacctacaggacatacagct
agtgacatttgccaagaaattgaagtacataatctactcattattgatcaacatactttc
gaagttttacatgcacatatgttaatgcctactgaatatgcgctatcattgatatcaacg
aaattaggtgaagatcctacttcctattatatagttggaactgcacttgttcatccagat
gaaactgaaccgaagatgggtagaatacttttatatcactggagtgatggaaaacttacg
caagtagcagaaaaagagatcaaaggatcatgttattctttaactgaattcaatggaaaa
cttcttgctagtatcaacagcactgttcgtttatttgaatggacagcagagaaggaactc
agattagaatgcagccactttaataatatcattgccctttacttgaaaacaaaaggagat
ttcattttagttggagatcttatgagatctctcactttgttgcaatataaaacaatggaa
ggttgctttgaagaaatagcaagagattataatccaaattggatgactgctattgaaatt
ttagatgatgatactttcttaggtgctgaaaattgctttaatctatttgtttgtcagaaa
gatagtgcggctacttcagaagatgaaagacaacaaatgcaggaagttggacaatttcat
ttaggtgatatggttaacgtcttccgacatggatctttagtgatgcaaaatttaggtgaa
tcaagtacacctacacaaggttgtgtattgtttggaactgttagtggagcgattggttta
gtcacacaaattccattcacgttttatgaattcttaagaaatcttgaagaaagactaaca
ggtgtaataaaaagcgtcggtaaaatagaacacaatttttggagaagttttaacaccgaa
ttaaaaatcgagcagtgtgaaggttttatagatggagatttaattgaaagttttcttgat
ttgagtcctaataaaatggcagacgttgcgagtggtctaatgatcgacgatcctagtggc
atgaaaaaagaagcaacagtggatgatcttgtaaaaatagtagaagatctcacaagaata
cattag
DBGET
integrated database retrieval system
