Bombus vancouverensis nearcticus: 117156306
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Entry
117156306 CDS
T07628
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117156306
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bvan01007
]
117156306
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvan03016
]
117156306
Enzymes [BR:
bvan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117156306
Amino acid related enzymes [BR:
bvan01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117156306
Transfer RNA biogenesis [BR:
bvan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117156306
Prokaryotic type
117156306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117156306
NCBI-ProteinID:
XP_033189100
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MQVTVPDVPVHLSVQFSKLFRKDKGFDPDKVRENQRKRFKDVNLVDTVIEKDKIWRQLRH
RADNLNKLKNVCSKEIGEKMKKKEAVGGDDTVSKDILENLENLLPNNLKSLTVAQIKTVR
GSIDDAIRTNDKDLVLTELERNRALKEIGNILHESVPISNDEEENKVERTCGDCTQKKKY
SHVDLIYMIDGIDGERGTNVSGGRGYFLTGPAVFLQHALIQLALRQLHVKGYKPLYTPFF
MRKDVMQEVAQLSQFDEELYKVIGKGSERNDDKEIEEKYLIATSEQPIAAFHRNEWIPEN
ILPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNA
EEFYKSLEIPYRIVNIVSGALNNAASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLV
RYGQTKKMNANTDYVHMLNATMCAVTRVICAILEVHQTDTSVKVPKVLAQFMPTEYEYEI
PFVKPAPIDETEVKKQKKQKERKDVICT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaacagttccagacgttccagtacatctatcggtacagttctcaaagctgttt
cgaaaggataaagggtttgatccagataaagtgcgagaaaatcaaaggaaacgttttaaa
gatgtaaatttagtcgacacggtgatcgaaaaagataaaatctggcgtcagctgcgacac
agagctgataacttaaataaattaaaaaatgtatgcagcaaagagataggagagaaaatg
aaaaaaaaggaagcagtgggcggcgatgacactgtctcaaaggatattcttgaaaacctg
gaaaatttattgcctaataacctgaaatcgttaacagttgcacagatcaaaactgttcgt
ggttccatcgacgatgctattcgaacaaatgataaagatttagtcttaaccgaattggaa
agaaaccgtgcactcaaagaaataggaaacatattgcatgagtctgtaccaattagcaat
gacgaggaggaaaataaagttgagagaacttgtggagattgtacacagaaaaagaaatat
tctcatgttgacttaatatacatgatagatggtatagatggagaacgtggcactaatgtc
tcaggggggcgtggttattttttaacaggaccagcagtttttctgcagcatgcgttaatt
caattagctctcaggcagttacatgtaaaaggttacaaaccactttacacgccattcttt
atgcgtaaggatgttatgcaagaagtagcacaattatctcaatttgatgaagaattatac
aaggtaattggtaagggtagtgaacgcaatgacgataaagaaattgaagaaaaatatttg
attgctacatctgagcaaccgatagctgcgtttcatagaaacgaatggattcctgaaaat
attttaccaattaagtatgcaggactatctacatgttttaggcaagaagttggatctcat
ggacgtgatactagaggcatttttagggttcatcaatttgaaaaagtagagcaattctgt
ttaacatcaccatatgatgataaatcttggcaaatgatggaagaaatgatttcaaatgca
gaagaattttataaatctttggagatcccttatcgtatagtaaatatagtatctggtgca
ttgaataatgctgcttcaaaaaaactagacttagaagcatggtttccgggatcaagcgct
ttccgcgaactcgtctcatgtagcaactgcttagattatcaagcaagacgtttactggtc
agatatggtcaaaccaagaagatgaatgctaatacagattacgttcatatgttaaatgca
actatgtgtgcggttactcgcgtcatatgtgcaattttggaagtacatcaaacagatact
tctgttaaagtaccaaaggttcttgcacaatttatgccaacagaatacgagtatgaaatt
ccgtttgttaaaccagcacctatcgatgaaacagaagtaaaaaaacaaaaaaagcaaaag
gaacgaaaggatgttatctgcacttaa
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